Detail information of GWHGAAZE003145


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrBAO57288.13.06349E-43pseudo-response regulator [Ipomoea nil]
Swissprottr|Q9LVG4|APRR3_ARATH5E-18Two-component response regulator-like APRR3
trEMBLtr|X5I0R0|X5I0R0_IPONI1E-43Pseudo-response regulator {ECO:0000313|EMBL:BAO57288.1}
TAIR10AT5G60100.38E-14pseudo-response regulator 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9281560292816111+
GWHAAZE00000001mRNA9281560292816111+
GWHAAZE00000001exon9281560292815965+
GWHAAZE00000001exon9281609592816111+
GWHAAZE00000001CDS9281560292815965+
GWHAAZE00000001CDS9281609592816111+
Transcript Sequence

Network for GWHGAAZE003145

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12129PRR7 Circadian rhythm - plant map04712

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf51.088
SRR3591706second leaf48.939
SRR3591707mature leaf46.799
SRR3591708Shoot apex48.994
SRR3591709Stem58.574
SRR3591710White floral bud44.386
SRR3591711White flower46.377
SRR3591712Green floral bud34.343
SRR3591713Yellow flower44.969
SRP173429 SRR8316895Juvenile bud stage 19.621
SRR8316896Juvenile bud stage 22.934
SRR8316897Juvenile bud stage 15.622
SRR8316894Third green stage 11.034
SRR8316900Third green stage 23.392
SRR8316901Third green stage 22.170
SRR8316898Complete white stage 9.445
SRR8316899Complete white stage 32.741
SRR8316903Complete white stage 27.214
SRR8316902Silver flowering stage12.624
SRR8316904Silver flowering stage24.488
SRR8316905Silver flowering stage9.708
SRR8316906Gold flowering stage 32.344
SRR8316907Gold flowering stage 22.692
SRR8316908Gold flowering stage 33.939
SRP132670SRR6706286Control22.027
SRR6706287Light intensity 50%20.296
SRR6706288Light intensity 20%26.707
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.648
CNS0095593Slightly white alabastrum(diploid) 219.218
CNS0095594Slightly white alabastrum(diploid) 312.338
CNS0095595Whole white alabastrum(diploid) 216.890
CNS0095596Whole white alabastrum(diploid) 39.902
CNS0095597Whole white alabastrum(diploid) 416.599
CNS0095598Silvery flower (diploied) 146.303
CNS0095599Silvery flower (diploied) 233.652
CNS0095600Silvery flower (diploied) 346.663
CNS0095601Golden flower (diploid) 131.617
CNS0095602Golden flower (diploid) 243.751
CNS0095603Golden flower (diploid) 346.931
CNS0095604Slightly white alabastrum(tetraploid) 127.579
CNS0095605Slightly white alabastrum(tetraploid) 224.574
CNS0095606Slightly white alabastrum(tetraploid) 374.234
CNS0095607Whole white alabastrum(tetraploid) 117.825
CNS0095608Whole white alabastrum(tetraploid) 210.311
CNS0095609Whole white alabastrum(tetraploid) 348.178
CNS0095610Silvery flower (tetraploid) 181.165
CNS0095611Silvery flower (tetraploid) 249.751
CNS0095612Silvery flower (tetraploid) 320.810
CNS0095613Golden flower (tetraploid) 144.834
CNS0095614Golden flower (tetraploid) 262.457
CNS0095615Golden flower (tetraploid) 337.922
CRA001975CRR073297Stem 114.049
CRR073298Stem 212.027
CRR073299Stem 312.740
CRR073300Leaf 110.315
CRR073301Leaf 211.431
CRR073302Leaf 38.462
CRR073303Juvenile bud 15.791
CRR073304Juvenile bud 29.224
CRR073305Juvenile bud 314.239
CRR073306Third green 11.853
CRR073307Third green 21.640
CRR073308Third green 31.267
CRR073309Second white 10.966
CRR073310Second white 21.670
CRR073311Second white 31.064
CRR073312Silver flowering 10.641
CRR073313Silver flowering 20.793
CRR073314Silver flowering 31.524
CRR073315Gold flowering 13.204
CRR073316Gold flowering 27.906
CRR073317Gold flowering 35.077
CRR073318Tawny withering 18.405
CRR073319Tawny withering 24.776
CRR073320Tawny withering 35.413