Detail information of GWHGAAZE003159


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGE10599.16.1211E-173chalcone isomerase [Lonicera japonica]
Swissprottr|Q45QI7|CFI_CAMSI1E-119Chalcone--flavonone isomerase
trEMBLtr|L7Z3H3|L7Z3H3_LONJA2E-173Chalcone-flavonone isomerase family protein {ECO:0000256|RuleBase:RU361158}
TAIR10AT3G55120.12E-79Chalcone-flavanone isomerase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9298896192992286-
GWHAAZE00000001mRNA9298896192992286-
GWHAAZE00000001exon9298896192989194-
GWHAAZE00000001exon9298967492989897-
GWHAAZE00000001exon9299192292992080-
GWHAAZE00000001exon9299218192992286-
GWHAAZE00000001CDS9299218192992286-
GWHAAZE00000001CDS9299192292992080-
GWHAAZE00000001CDS9298967492989897-
GWHAAZE00000001CDS9298896192989194-
Transcript Sequence

Network for GWHGAAZE003159

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02431.16Chalcone122144.40E-99
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01859E5.5.1.6 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0016872molecular_functionintramolecular lyase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf233.669
SRR3591706second leaf155.121
SRR3591707mature leaf107.970
SRR3591708Shoot apex184.745
SRR3591709Stem306.526
SRR3591710White floral bud87.498
SRR3591711White flower70.974
SRR3591712Green floral bud115.783
SRR3591713Yellow flower54.294
SRP173429 SRR8316895Juvenile bud stage 108.610
SRR8316896Juvenile bud stage 135.854
SRR8316897Juvenile bud stage 59.997
SRR8316894Third green stage 45.356
SRR8316900Third green stage 131.516
SRR8316901Third green stage 165.994
SRR8316898Complete white stage 49.885
SRR8316899Complete white stage 135.453
SRR8316903Complete white stage 70.600
SRR8316902Silver flowering stage48.926
SRR8316904Silver flowering stage67.971
SRR8316905Silver flowering stage33.090
SRR8316906Gold flowering stage 74.456
SRR8316907Gold flowering stage 74.065
SRR8316908Gold flowering stage 63.937
SRP132670SRR6706286Control125.718
SRR6706287Light intensity 50%106.902
SRR6706288Light intensity 20%99.069
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1137.620
CNS0095593Slightly white alabastrum(diploid) 2113.517
CNS0095594Slightly white alabastrum(diploid) 3149.385
CNS0095595Whole white alabastrum(diploid) 285.784
CNS0095596Whole white alabastrum(diploid) 367.634
CNS0095597Whole white alabastrum(diploid) 482.372
CNS0095598Silvery flower (diploied) 1140.804
CNS0095599Silvery flower (diploied) 2112.837
CNS0095600Silvery flower (diploied) 3110.338
CNS0095601Golden flower (diploid) 1118.354
CNS0095602Golden flower (diploid) 2119.600
CNS0095603Golden flower (diploid) 3112.490
CNS0095604Slightly white alabastrum(tetraploid) 1122.198
CNS0095605Slightly white alabastrum(tetraploid) 286.073
CNS0095606Slightly white alabastrum(tetraploid) 3263.373
CNS0095607Whole white alabastrum(tetraploid) 157.513
CNS0095608Whole white alabastrum(tetraploid) 260.269
CNS0095609Whole white alabastrum(tetraploid) 3219.613
CNS0095610Silvery flower (tetraploid) 1213.707
CNS0095611Silvery flower (tetraploid) 2160.747
CNS0095612Silvery flower (tetraploid) 363.539
CNS0095613Golden flower (tetraploid) 1187.013
CNS0095614Golden flower (tetraploid) 2231.075
CNS0095615Golden flower (tetraploid) 3142.759
CRA001975CRR073297Stem 1100.950
CRR073298Stem 283.757
CRR073299Stem 387.929
CRR073300Leaf 164.021
CRR073301Leaf 287.552
CRR073302Leaf 380.077
CRR073303Juvenile bud 163.199
CRR073304Juvenile bud 268.160
CRR073305Juvenile bud 370.467
CRR073306Third green 159.210
CRR073307Third green 260.132
CRR073308Third green 356.743
CRR073309Second white 124.986
CRR073310Second white 223.577
CRR073311Second white 315.568
CRR073312Silver flowering 117.616
CRR073313Silver flowering 217.673
CRR073314Silver flowering 318.975
CRR073315Gold flowering 1126.686
CRR073316Gold flowering 2109.406
CRR073317Gold flowering 397.149
CRR073318Tawny withering 166.959
CRR073319Tawny withering 276.947
CRR073320Tawny withering 345.611