Detail information of GWHGAAZE003166


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP19954.11.7046E-177unnamed protein product [Coffea canephora]
COGYP_003571913.15E-36lysophospholipase
Swissprottr|Q9C942|CSE_ARATH9E-46Caffeoylshikimate esterase
trEMBLtr|A0A068VH95|A0A068VH95_COFCA6E-178Coffea canephora DH200=94 genomic scaffold, scaffold_803 {ECO:0000313|EMBL:CDP19954.1}
TAIR10AT2G39420.16E-126alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9311218593114711+
GWHAAZE00000001mRNA9311218593114711+
GWHAAZE00000001exon9311218593112217+
GWHAAZE00000001exon9311233193112457+
GWHAAZE00000001exon9311259493112794+
GWHAAZE00000001exon9311301993113203+
GWHAAZE00000001exon9311388793114024+
GWHAAZE00000001exon9311420893114306+
GWHAAZE00000001exon9311441293114711+
GWHAAZE00000001CDS9311218593112217+
GWHAAZE00000001CDS9311233193112457+
GWHAAZE00000001CDS9311259493112794+
GWHAAZE00000001CDS9311301993113203+
GWHAAZE00000001CDS9311388793114024+
GWHAAZE00000001CDS9311420893114306+
GWHAAZE00000001CDS9311441293114711+
Transcript Sequence

Network for GWHGAAZE003166

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.9Hydrolase_4331028.50E-17
PF12146.9Hydrolase_41403061.40E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01054MGLL Metabolic pathways map01100
Glycerolipid metabolismmap00561
Regulation of lipolysis in adipocytesmap04923
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf43.148
SRR3591706second leaf7.008
SRR3591707mature leaf24.209
SRR3591708Shoot apex8.116
SRR3591709Stem92.427
SRR3591710White floral bud25.783
SRR3591711White flower83.070
SRR3591712Green floral bud13.309
SRR3591713Yellow flower188.465
SRP173429 SRR8316895Juvenile bud stage 31.875
SRR8316896Juvenile bud stage 63.906
SRR8316897Juvenile bud stage 20.771
SRR8316894Third green stage 2.799
SRR8316900Third green stage 8.326
SRR8316901Third green stage 15.485
SRR8316898Complete white stage 15.483
SRR8316899Complete white stage 37.178
SRR8316903Complete white stage 24.316
SRR8316902Silver flowering stage20.033
SRR8316904Silver flowering stage21.121
SRR8316905Silver flowering stage10.500
SRR8316906Gold flowering stage 36.690
SRR8316907Gold flowering stage 37.349
SRR8316908Gold flowering stage 34.148
SRP132670SRR6706286Control7.051
SRR6706287Light intensity 50%7.355
SRR6706288Light intensity 20%5.419
CNP0000432CNS0095592Slightly white alabastrum(diploid) 133.324
CNS0095593Slightly white alabastrum(diploid) 260.091
CNS0095594Slightly white alabastrum(diploid) 376.937
CNS0095595Whole white alabastrum(diploid) 269.858
CNS0095596Whole white alabastrum(diploid) 312.121
CNS0095597Whole white alabastrum(diploid) 437.650
CNS0095598Silvery flower (diploied) 1107.438
CNS0095599Silvery flower (diploied) 2131.796
CNS0095600Silvery flower (diploied) 348.321
CNS0095601Golden flower (diploid) 176.738
CNS0095602Golden flower (diploid) 2101.111
CNS0095603Golden flower (diploid) 399.900
CNS0095604Slightly white alabastrum(tetraploid) 17.015
CNS0095605Slightly white alabastrum(tetraploid) 26.132
CNS0095606Slightly white alabastrum(tetraploid) 31.819
CNS0095607Whole white alabastrum(tetraploid) 110.217
CNS0095608Whole white alabastrum(tetraploid) 213.078
CNS0095609Whole white alabastrum(tetraploid) 37.000
CNS0095610Silvery flower (tetraploid) 114.315
CNS0095611Silvery flower (tetraploid) 25.908
CNS0095612Silvery flower (tetraploid) 313.909
CNS0095613Golden flower (tetraploid) 117.312
CNS0095614Golden flower (tetraploid) 216.669
CNS0095615Golden flower (tetraploid) 317.456
CRA001975CRR073297Stem 117.420
CRR073298Stem 220.380
CRR073299Stem 315.124
CRR073300Leaf 126.494
CRR073301Leaf 227.759
CRR073302Leaf 317.532
CRR073303Juvenile bud 116.826
CRR073304Juvenile bud 229.576
CRR073305Juvenile bud 323.752
CRR073306Third green 122.003
CRR073307Third green 230.106
CRR073308Third green 326.529
CRR073309Second white 133.149
CRR073310Second white 233.438
CRR073311Second white 335.498
CRR073312Silver flowering 1104.399
CRR073313Silver flowering 281.140
CRR073314Silver flowering 3104.451
CRR073315Gold flowering 1125.978
CRR073316Gold flowering 2234.507
CRR073317Gold flowering 3142.241
CRR073318Tawny withering 1169.073
CRR073319Tawny withering 2473.094
CRR073320Tawny withering 3134.798