Detail information of GWHGAAZE003177


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009601954.11.0579E-167PREDICTED: WAT1-related protein At2g39510-like isoform X1 [Nicotiana tomentosiformis]
Swissprottr|O80638|WTR14_ARATH7E-150WAT1-related protein At2g39510
trEMBLtr|M1CWJ1|M1CWJ1_SOLTU2E-167Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400076318}
TAIR10AT2G39510.18E-116nodulin MtN21 /EamA-like transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9332559793328121-
GWHAAZE00000001mRNA9332559793328121-
GWHAAZE00000001exon9332559793325804-
GWHAAZE00000001exon9332592993326080-
GWHAAZE00000001exon9332631693326477-
GWHAAZE00000001exon9332689593327141-
GWHAAZE00000001exon9332730693327422-
GWHAAZE00000001exon9332777193327833-
GWHAAZE00000001exon9332792893328121-
GWHAAZE00000001CDS9332792893328121-
GWHAAZE00000001CDS9332777193327833-
GWHAAZE00000001CDS9332730693327422-
GWHAAZE00000001CDS9332689593327141-
GWHAAZE00000001CDS9332631693326477-
GWHAAZE00000001CDS9332592993326080-
GWHAAZE00000001CDS9332559793325804-
Transcript Sequence

Network for GWHGAAZE003177

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0092


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00892.21EamA171511.40E-13
PF00892.21EamA1883273.00E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020cellular_componentmembrane
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.162
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.257
SRR3591711White flower0.245
SRR3591712Green floral bud0.843
SRR3591713Yellow flower0.232
SRP173429 SRR8316895Juvenile bud stage 0.177
SRR8316896Juvenile bud stage 0.234
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.119
SRR8316900Third green stage 0.694
SRR8316901Third green stage 0.769
SRR8316898Complete white stage 3.906
SRR8316899Complete white stage 11.104
SRR8316903Complete white stage 4.940
SRR8316902Silver flowering stage0.192
SRR8316904Silver flowering stage0.004
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.107
SRR6706287Light intensity 50%0.365
SRR6706288Light intensity 20%0.239
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.612
CNS0095593Slightly white alabastrum(diploid) 20.394
CNS0095594Slightly white alabastrum(diploid) 30.105
CNS0095595Whole white alabastrum(diploid) 20.587
CNS0095596Whole white alabastrum(diploid) 30.280
CNS0095597Whole white alabastrum(diploid) 40.363
CNS0095598Silvery flower (diploied) 10.549
CNS0095599Silvery flower (diploied) 20.024
CNS0095600Silvery flower (diploied) 30.044
CNS0095601Golden flower (diploid) 10.352
CNS0095602Golden flower (diploid) 20.071
CNS0095603Golden flower (diploid) 30.117
CNS0095604Slightly white alabastrum(tetraploid) 10.195
CNS0095605Slightly white alabastrum(tetraploid) 20.100
CNS0095606Slightly white alabastrum(tetraploid) 30.303
CNS0095607Whole white alabastrum(tetraploid) 10.113
CNS0095608Whole white alabastrum(tetraploid) 20.073
CNS0095609Whole white alabastrum(tetraploid) 30.422
CNS0095610Silvery flower (tetraploid) 10.075
CNS0095611Silvery flower (tetraploid) 20.068
CNS0095612Silvery flower (tetraploid) 30.145
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.062
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.111
CRR073298Stem 20.000
CRR073299Stem 30.190
CRR073300Leaf 10.564
CRR073301Leaf 20.327
CRR073302Leaf 30.111
CRR073303Juvenile bud 12.311
CRR073304Juvenile bud 20.327
CRR073305Juvenile bud 32.724
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.358
CRR073319Tawny withering 20.172
CRR073320Tawny withering 30.899