Gene detail

Detail information of GWHGAAZE003243

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011076782.1	0	PREDICTED: cucumisin-like [Sesamum indicum]
COG	YP_004097803.1	6E-95	peptidase S8 and S53 subtilisin kexin sedolisin
Swissprot	tr\|Q39547\|CUCM1_CUCME	0	Cucumisin (Precursor)
trEMBL	tr\|F6HNS4\|F6HNS4_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB56293.1}
TAIR10	AT3G46850.1	3E-169	Subtilase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	94619310	94622678	+
GWHAAZE00000001	mRNA	94619310	94622678	+
GWHAAZE00000001	exon	94619310	94619357	+
GWHAAZE00000001	exon	94619541	94619629	+
GWHAAZE00000001	exon	94619888	94619982	+
GWHAAZE00000001	exon	94620091	94620334	+
GWHAAZE00000001	exon	94620529	94621042	+
GWHAAZE00000001	exon	94621141	94621244	+
GWHAAZE00000001	exon	94621347	94621565	+
GWHAAZE00000001	exon	94621651	94621762	+
GWHAAZE00000001	exon	94621841	94622054	+
GWHAAZE00000001	exon	94622152	94622678	+
GWHAAZE00000001	CDS	94619310	94619357	+
GWHAAZE00000001	CDS	94619541	94619629	+
GWHAAZE00000001	CDS	94619888	94619982	+
GWHAAZE00000001	CDS	94620091	94620334	+
GWHAAZE00000001	CDS	94620529	94621042	+
GWHAAZE00000001	CDS	94621141	94621244	+
GWHAAZE00000001	CDS	94621347	94621565	+
GWHAAZE00000001	CDS	94621651	94621762	+
GWHAAZE00000001	CDS	94621841	94622054	+
GWHAAZE00000001	CDS	94622152	94622678	+

Transcript Sequence
>GWHTAAZE003249 ATGGCTACTTCGTTTTCTCCTCTGCTATGGCTTCTCGTGATCACCATTGTTTACATCGTGTACATGGGTGACCTTCCAAAGGGTGGTTTGTCTGCATCATCCTTCCATGCTAGCATGCTAGAACAAGTTGTCGGGAGCAGGAGGGCATCAGACGCTCTACTCTACAGCTACAAGAGAAGCTTCAACGGATTTGTAGCGAAGTTGACAGTGGAAGAGAGCCAAAAAATAGCTAGCATGGATGGTGTAGTCTCTGTATTCCCTAGTACAAAGAAGCAACTCCACACGACAAGGTCGTGGGACTTTATAGGCTTCCCTCAGGAGGCTAAAAAATCACCCCTTGGAAGCGACATTATCGTTGGTATGCTCGATACCGGAATCTGGCCTGAATCTGACAGCTTTAGTGACGAAGGGTTCGGTCCCCCTCCCACCAAGTGGAAGGGCTCTTGCCAATCTTCAACCAACTTCACTTGCAACAACAAAGTAATCGGGGCCAAATTCTACCATAGCGAAGGAAAGGTGGGGAGCAAAGACTTCCCTTCGCCCAGAGACTCAGAAGGGCATGGATCACACACTGCATCCACAGCAGCCGGACTTGTAGTAGGCAACACAAGCTTATTAGGCCTTGGATTGGGATCAGCACGAGGCGGGGTCCCCTCAGCGCGTCTTGCAGTGTACAAGATCTGTTGGTCCGATGGCTGCTCTGACGCTGACATCTTAGCAGCATTCGATGATGCAATTGCCGATGGAGTTGATGTGATCTCTCTTTCAGTCGGGGGTTCTTTTCCTGTTGATTACTTTGAAGATCCAATTGCAATAGGCGCTTTTCACTCGATGAAGAGTGGGATTTTAACATCCAACTCTGCTGGAAACTCGGGCCCGGTTCCTGAATCAATTACTAATTTCTCCCCATGGTCTCTCTCTGTTGCTGCCAGCACCATTGATAGAAGGTTTGTGACCAAGGTGAAGCTGGGTAATAATGAAGTTTATGAGGGATTCACTGTCAACACTTTTCAGCTAGAGGATGAATCTTACCCATTAGTTTATGGTGGAGATGTGCCTAATGCTACAGCTGGTTTTGATGGATCCGATTCCCGGTACTGCTCAGATGATTCATTGGACAAAACATTGGTAATGGGTAAAATTGTTCTTTGCGACGAATTGAATGATGGAGAAGGTACATTGAATTCAGGTGCAATTGGTACTGTGATGCAAGATGATGGCTTTAAGGATGTTGCCTTCTCTTTCCCCTTGTCTGCGTCTTACCTGAGCTCCAAGGATGGCAATTCGGTTTATACATATATAAATACAACCATAAACGCGACTGCAACAATTTTGAAGAGCATTGGAAGTTACGATCCATTAGCCCCATCCGTAGTATCCTTCTCATCTAGAGGACCAAACCCAATCACAAGGGATATCCTCAAGCCCGATTTAACTGCACCTGGAGTTGACATTCTCGCAGCATGGTCAATGGCTACAACCGTAACCGGACTAGAAGGAGATACAAGAGTCGTACCATACAACATTATCTCCGGTACATCCATGTCATGCCCACATGCTTCTGGTGCAGCTGCATACGTTAAATCATTCCACCCGACCTGGTCAGCTGCTGCAGTCAAGTCTGCTCTTATGACAACTGCATCACCTATGAGTATTTCTAGTAACACAGATGCGGAGTTTGCATATGGGTCGGGTCAACTAAACCCGTTAAATGCTGCAGACCCGGGTCTAGTATATGATGCAGGGGAGGCCGATTATGTTAAATTCTTGTGCGGGCAAGGCTATAGCTCTAAGTCTCTTCAACTCCTTACCGGGGATAATAGTACTTGCACTGCAGCCAACAATGGGACCGTTTGGGACCTAAATTATCCTTCTTTTGCTGTATCCTCCCAGCTTTCGGGTCCTTTGACTCGCGTGTTCCACAGGACCGTAACGAATGTGGGGTCCCCCGTGTCGACCTACAAGGCAATCGTGACATCCCCACAAGGACTAGTGGTCAATGTGGAGCCCAGTGTCCTTTCATTCAAATCGATGGGACAGAAGATGTCATTCGTTGTAACAGTTGTAGCTACACCAGGTGCCGGCATAGTGTCGGGTTCTTTGGTGTGGGATGATGGGGTTTTCCAAGTGAGGAGCCCCATTGTTGCATTTGGTGATCGATTCTGA

Network for GWHGAAZE003243

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0015

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.17	Inhibitor_I9	17	94	4.50E-12
PF00082.23	Peptidase_S8	114	563	1.20E-43
PF17766.2	fn3_6	620	715	1.10E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	biological_process	proteolysis
GO:0004252	molecular_function	serine-type endopeptidase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.006
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.001
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000