Gene detail

Detail information of GWHGAAZE003270

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ACR09747.1	0	DIV2B protein [Heptacodium miconioides]
Swissprot	tr\|Q8S9H7\|DIV_ANTMA	8E-88	Transcription factor DIVARICATA
trEMBL	tr\|C5I9W3\|C5I9W3_9DIPS	0	DIV2B protein {ECO:0000313\|EMBL:ACR09747.1}
TAIR10	AT2G38090.1	1E-64	Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	95022447	95023818	+
GWHAAZE00000001	mRNA	95022447	95023818	+
GWHAAZE00000001	exon	95022447	95022841	+
GWHAAZE00000001	exon	95023410	95023818	+
GWHAAZE00000001	CDS	95022447	95022841	+
GWHAAZE00000001	CDS	95023410	95023818	+

Transcript Sequence
>GWHTAAZE003276 ATGGAGACTCTGTATCCAACATCTTATATATCCAACATAAATTGGTTTATGGAAGAGAGTACAAGCAAGAATTGGACTAGAGAAGAGAACAAGAGGTTTGAGAGTGCTTTAGCAATCTTCGATAAAGAAACCCCGGATCGATGGACAAAGGTAGCAGAAATGATACCCGGGAAATCGGTGCTCGATGTGATTGAACAGTATAAGGAGTTGGTAGCAGATATTAGTGATATTGAAGCTGGGTTGGTTCCAATTCCGGGGTATCTTACCTCTTCTTTTACTTTCGAGTTGGTTGATAATACAAGGTTTAATGATTTTAGAAAGAGGGGTTCGTTCGGTCGATCGTCTTCTGATCAGGAGAGGAAGAAAGGTGTGCCTTGGACTGAAGATGAGCACAGGCGGTTTCTAATGGGTCTTGAGAAGCATGGTCGAGGGGACTGGAGGAACATATCCCGTAATTTTGTTATAACAAAGACACCCACTCAAGTGGCAAGCCATGCGCAAAAGTACTACGCGAGGCTGCAATCAGAAGGGAAAGAAAAGAGGAGACCTAGCATCCACGACATCAGAACCGTACATCTCACAGACACTACTACTCCTTCATTTGATAAGTCTTCTTCCATTGCAAATCCACAAGACTCCTCCACTACTTCACCAAAAGTATTACTAGACTGGAAGCACTCAAATGGCGGAGTAATGGTTTTTGACTCGACCCAAGGTAACCCGTTTGTGGCATATCCGTACGAAATTGGACCTCTTAATTCTGGGTTTCAAATCCAATCAACTAGGTATCAAATTCGAGGCTGA

Network for GWHGAAZE003270

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.32	Myb_DNA-binding	23	69	1.30E-06
PF00249.32	Myb_DNA-binding	125	169	2.50E-11

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	29.994
	SRR3591706	second leaf	46.077
	SRR3591707	mature leaf	50.896
	SRR3591708	Shoot apex	40.625
	SRR3591709	Stem	75.165
	SRR3591710	White floral bud	36.255
	SRR3591711	White flower	40.795
	SRR3591712	Green floral bud	49.911
	SRR3591713	Yellow flower	8.735
SRP173429	SRR8316895	Juvenile bud stage	7.904
	SRR8316896	Juvenile bud stage	11.462
	SRR8316897	Juvenile bud stage	2.316
	SRR8316894	Third green stage	6.347
	SRR8316900	Third green stage	17.662
	SRR8316901	Third green stage	11.479
	SRR8316898	Complete white stage	6.653
	SRR8316899	Complete white stage	43.360
	SRR8316903	Complete white stage	10.564
	SRR8316902	Silver flowering stage	6.551
	SRR8316904	Silver flowering stage	5.852
	SRR8316905	Silver flowering stage	3.018
	SRR8316906	Gold flowering stage	3.669
	SRR8316907	Gold flowering stage	4.676
	SRR8316908	Gold flowering stage	5.357
SRP132670	SRR6706286	Control	16.071
	SRR6706287	Light intensity 50%	15.872
	SRR6706288	Light intensity 20%	20.596
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.699
	CNS0095593	Slightly white alabastrum(diploid) 2	20.906
	CNS0095594	Slightly white alabastrum(diploid) 3	16.790
	CNS0095595	Whole white alabastrum(diploid) 2	19.825
	CNS0095596	Whole white alabastrum(diploid) 3	9.373
	CNS0095597	Whole white alabastrum(diploid) 4	15.802
	CNS0095598	Silvery flower (diploied) 1	27.278
	CNS0095599	Silvery flower (diploied) 2	17.675
	CNS0095600	Silvery flower (diploied) 3	16.337
	CNS0095601	Golden flower (diploid) 1	9.988
	CNS0095602	Golden flower (diploid) 2	8.701
	CNS0095603	Golden flower (diploid) 3	8.035
	CNS0095604	Slightly white alabastrum(tetraploid) 1	21.686
	CNS0095605	Slightly white alabastrum(tetraploid) 2	19.088
	CNS0095606	Slightly white alabastrum(tetraploid) 3	45.512
	CNS0095607	Whole white alabastrum(tetraploid) 1	20.178
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.867
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.595
	CNS0095610	Silvery flower (tetraploid) 1	20.882
	CNS0095611	Silvery flower (tetraploid) 2	17.651
	CNS0095612	Silvery flower (tetraploid) 3	13.930
	CNS0095613	Golden flower (tetraploid) 1	5.105
	CNS0095614	Golden flower (tetraploid) 2	12.472
	CNS0095615	Golden flower (tetraploid) 3	4.608
CRA001975	CRR073297	Stem 1	8.237
	CRR073298	Stem 2	8.904
	CRR073299	Stem 3	14.710
	CRR073300	Leaf 1	14.818
	CRR073301	Leaf 2	15.527
	CRR073302	Leaf 3	11.932
	CRR073303	Juvenile bud 1	15.682
	CRR073304	Juvenile bud 2	6.043
	CRR073305	Juvenile bud 3	23.717
	CRR073306	Third green 1	5.491
	CRR073307	Third green 2	11.103
	CRR073308	Third green 3	9.797
	CRR073309	Second white 1	0.953
	CRR073310	Second white 2	1.819
	CRR073311	Second white 3	0.590
	CRR073312	Silver flowering 1	0.507
	CRR073313	Silver flowering 2	1.167
	CRR073314	Silver flowering 3	0.335
	CRR073315	Gold flowering 1	16.597
	CRR073316	Gold flowering 2	15.301
	CRR073317	Gold flowering 3	18.286
	CRR073318	Tawny withering 1	34.207
	CRR073319	Tawny withering 2	34.473
	CRR073320	Tawny withering 3	33.941