Detail information of GWHGAAZE003271


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008233718.10PREDICTED: coronatine-insensitive protein 1 [Prunus mume]
Swissprottr|O04197|COI1_ARATH0Coronatine-insensitive protein 1
trEMBLtr|M5X6S0|M5X6S0_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ21634.1}
TAIR10AT2G39940.10RNI-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9503112895034803-
GWHAAZE00000001mRNA9503112895034803-
GWHAAZE00000001exon9503434695034803-
GWHAAZE00000001exon9503243595032906-
GWHAAZE00000001exon9503112895031928-
GWHAAZE00000001CDS9503434695034803-
GWHAAZE00000001CDS9503243595032906-
GWHAAZE00000001CDS9503112895031928-
Transcript Sequence

Network for GWHGAAZE003271

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF18511.2F-box_53436.40E-22
PF18791.2Transp_inhibit631083.10E-23
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
K13463COI-1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.372
SRR3591706second leaf20.971
SRR3591707mature leaf42.719
SRR3591708Shoot apex20.371
SRR3591709Stem36.449
SRR3591710White floral bud23.804
SRR3591711White flower26.589
SRR3591712Green floral bud26.428
SRR3591713Yellow flower15.508
SRP173429 SRR8316895Juvenile bud stage 12.925
SRR8316896Juvenile bud stage 14.968
SRR8316897Juvenile bud stage 8.106
SRR8316894Third green stage 6.222
SRR8316900Third green stage 19.010
SRR8316901Third green stage 17.465
SRR8316898Complete white stage 6.889
SRR8316899Complete white stage 29.965
SRR8316903Complete white stage 14.184
SRR8316902Silver flowering stage6.130
SRR8316904Silver flowering stage8.367
SRR8316905Silver flowering stage3.667
SRR8316906Gold flowering stage 7.965
SRR8316907Gold flowering stage 9.220
SRR8316908Gold flowering stage 10.815
SRP132670SRR6706286Control7.184
SRR6706287Light intensity 50%8.276
SRR6706288Light intensity 20%11.522
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.182
CNS0095593Slightly white alabastrum(diploid) 216.353
CNS0095594Slightly white alabastrum(diploid) 314.732
CNS0095595Whole white alabastrum(diploid) 220.123
CNS0095596Whole white alabastrum(diploid) 312.147
CNS0095597Whole white alabastrum(diploid) 418.977
CNS0095598Silvery flower (diploied) 120.904
CNS0095599Silvery flower (diploied) 217.837
CNS0095600Silvery flower (diploied) 318.746
CNS0095601Golden flower (diploid) 115.951
CNS0095602Golden flower (diploid) 216.783
CNS0095603Golden flower (diploid) 317.837
CNS0095604Slightly white alabastrum(tetraploid) 117.100
CNS0095605Slightly white alabastrum(tetraploid) 213.042
CNS0095606Slightly white alabastrum(tetraploid) 328.860
CNS0095607Whole white alabastrum(tetraploid) 110.686
CNS0095608Whole white alabastrum(tetraploid) 211.840
CNS0095609Whole white alabastrum(tetraploid) 317.338
CNS0095610Silvery flower (tetraploid) 121.630
CNS0095611Silvery flower (tetraploid) 220.089
CNS0095612Silvery flower (tetraploid) 327.189
CNS0095613Golden flower (tetraploid) 111.258
CNS0095614Golden flower (tetraploid) 219.436
CNS0095615Golden flower (tetraploid) 312.899
CRA001975CRR073297Stem 114.263
CRR073298Stem 212.681
CRR073299Stem 314.928
CRR073300Leaf 119.085
CRR073301Leaf 217.577
CRR073302Leaf 313.627
CRR073303Juvenile bud 119.613
CRR073304Juvenile bud 213.066
CRR073305Juvenile bud 325.332
CRR073306Third green 19.889
CRR073307Third green 210.061
CRR073308Third green 310.351
CRR073309Second white 19.145
CRR073310Second white 29.686
CRR073311Second white 310.309
CRR073312Silver flowering 16.688
CRR073313Silver flowering 29.654
CRR073314Silver flowering 37.126
CRR073315Gold flowering 116.366
CRR073316Gold flowering 222.137
CRR073317Gold flowering 317.852
CRR073318Tawny withering 118.605
CRR073319Tawny withering 226.292
CRR073320Tawny withering 324.076