Detail information of GWHGAAZE003324


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273730.20PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Vitis vinifera]
COGYP_004468471.11E-153NAD-dependent aldehyde dehydrogenase
Swissprottr|Q8W033|AL3I1_ARATH0Aldehyde dehydrogenase family 3 member I1, chloroplastic (Precursor)
trEMBLtr|D7SWG5|D7SWG5_VITVI0Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}
TAIR10AT1G44170.20aldehyde dehydrogenase 3H1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9601335896018106-
GWHAAZE00000001mRNA9601335896018106-
GWHAAZE00000001exon9601335896013597-
GWHAAZE00000001exon9601415996014308-
GWHAAZE00000001exon9601454496014634-
GWHAAZE00000001exon9601472196014893-
GWHAAZE00000001exon9601497296015076-
GWHAAZE00000001exon9601526596015380-
GWHAAZE00000001exon9601575596015961-
GWHAAZE00000001exon9601650696016602-
GWHAAZE00000001exon9601668096016748-
GWHAAZE00000001exon9601695096017234-
GWHAAZE00000001exon9601793696018106-
GWHAAZE00000001CDS9601793696018106-
GWHAAZE00000001CDS9601695096017234-
GWHAAZE00000001CDS9601668096016748-
GWHAAZE00000001CDS9601650696016602-
GWHAAZE00000001CDS9601575596015961-
GWHAAZE00000001CDS9601526596015380-
GWHAAZE00000001CDS9601497296015076-
GWHAAZE00000001CDS9601472196014893-
GWHAAZE00000001CDS9601454496014634-
GWHAAZE00000001CDS9601415996014308-
GWHAAZE00000001CDS9601335896013597-
Transcript Sequence

Network for GWHGAAZE003324

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00171.23Aldedh905228.30E-84
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00128ALDH Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Glycolysis / Gluconeogenesismap00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.818
SRR3591706second leaf21.059
SRR3591707mature leaf29.099
SRR3591708Shoot apex21.666
SRR3591709Stem12.939
SRR3591710White floral bud24.705
SRR3591711White flower26.374
SRR3591712Green floral bud10.015
SRR3591713Yellow flower30.872
SRP173429 SRR8316895Juvenile bud stage 11.106
SRR8316896Juvenile bud stage 15.429
SRR8316897Juvenile bud stage 11.520
SRR8316894Third green stage 7.263
SRR8316900Third green stage 19.471
SRR8316901Third green stage 18.831
SRR8316898Complete white stage 23.267
SRR8316899Complete white stage 31.733
SRR8316903Complete white stage 34.911
SRR8316902Silver flowering stage13.320
SRR8316904Silver flowering stage25.905
SRR8316905Silver flowering stage12.344
SRR8316906Gold flowering stage 19.268
SRR8316907Gold flowering stage 14.938
SRR8316908Gold flowering stage 16.529
SRP132670SRR6706286Control13.231
SRR6706287Light intensity 50%12.224
SRR6706288Light intensity 20%12.634
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.553
CNS0095593Slightly white alabastrum(diploid) 210.249
CNS0095594Slightly white alabastrum(diploid) 39.125
CNS0095595Whole white alabastrum(diploid) 210.324
CNS0095596Whole white alabastrum(diploid) 39.631
CNS0095597Whole white alabastrum(diploid) 49.979
CNS0095598Silvery flower (diploied) 139.634
CNS0095599Silvery flower (diploied) 230.576
CNS0095600Silvery flower (diploied) 335.414
CNS0095601Golden flower (diploid) 132.172
CNS0095602Golden flower (diploid) 229.071
CNS0095603Golden flower (diploid) 332.301
CNS0095604Slightly white alabastrum(tetraploid) 110.402
CNS0095605Slightly white alabastrum(tetraploid) 29.188
CNS0095606Slightly white alabastrum(tetraploid) 317.578
CNS0095607Whole white alabastrum(tetraploid) 19.842
CNS0095608Whole white alabastrum(tetraploid) 27.227
CNS0095609Whole white alabastrum(tetraploid) 313.042
CNS0095610Silvery flower (tetraploid) 144.633
CNS0095611Silvery flower (tetraploid) 240.855
CNS0095612Silvery flower (tetraploid) 325.160
CNS0095613Golden flower (tetraploid) 129.895
CNS0095614Golden flower (tetraploid) 233.747
CNS0095615Golden flower (tetraploid) 331.349
CRA001975CRR073297Stem 115.632
CRR073298Stem 213.462
CRR073299Stem 38.984
CRR073300Leaf 113.166
CRR073301Leaf 212.607
CRR073302Leaf 38.346
CRR073303Juvenile bud 18.301
CRR073304Juvenile bud 25.894
CRR073305Juvenile bud 38.708
CRR073306Third green 16.619
CRR073307Third green 27.002
CRR073308Third green 36.805
CRR073309Second white 16.618
CRR073310Second white 28.360
CRR073311Second white 36.418
CRR073312Silver flowering 13.980
CRR073313Silver flowering 22.212
CRR073314Silver flowering 32.973
CRR073315Gold flowering 114.632
CRR073316Gold flowering 223.395
CRR073317Gold flowering 37.927
CRR073318Tawny withering 110.259
CRR073319Tawny withering 29.683
CRR073320Tawny withering 37.113