Detail information of GWHGAAZE003427


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010662269.10PREDICTED: ceramide kinase [Vitis vinifera]
COGYP_001516029.11E-11sphingosine kinase 2
Swissprottr|Q6USK2|CERK_ARATH0Ceramide kinase
trEMBLtr|F6I2T2|F6I2T2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB61249.1}
TAIR10AT5G51290.17E-164Diacylglycerol kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9766283497666222-
GWHAAZE00000001mRNA9766283497666222-
GWHAAZE00000001exon9766605597666222-
GWHAAZE00000001exon9766584497665936-
GWHAAZE00000001exon9766542897665520-
GWHAAZE00000001exon9766504297665267-
GWHAAZE00000001exon9766485897664942-
GWHAAZE00000001exon9766457997664728-
GWHAAZE00000001exon9766428997664390-
GWHAAZE00000001exon9766321497663558-
GWHAAZE00000001exon9766305097663116-
GWHAAZE00000001exon9766283497662971-
GWHAAZE00000001CDS9766605597666222-
GWHAAZE00000001CDS9766584497665936-
GWHAAZE00000001CDS9766542897665520-
GWHAAZE00000001CDS9766504297665267-
GWHAAZE00000001CDS9766485897664942-
GWHAAZE00000001CDS9766457997664728-
GWHAAZE00000001CDS9766428997664390-
GWHAAZE00000001CDS9766321497663558-
GWHAAZE00000001CDS9766305097663116-
GWHAAZE00000001CDS9766283497662971-
Transcript Sequence

Network for GWHGAAZE003427

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00781.25DAGK_cat551339.90E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04715CERK Sphingolipid metabolism map00600

Gene Ontology

GO term OntologyName
GO:0016301molecular_functionkinase activity
GO:0003951molecular_functionNAD+ kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.873
SRR3591706second leaf8.708
SRR3591707mature leaf8.993
SRR3591708Shoot apex13.324
SRR3591709Stem13.602
SRR3591710White floral bud22.367
SRR3591711White flower15.540
SRR3591712Green floral bud17.123
SRR3591713Yellow flower19.775
SRP173429 SRR8316895Juvenile bud stage 9.266
SRR8316896Juvenile bud stage 12.573
SRR8316897Juvenile bud stage 4.255
SRR8316894Third green stage 5.720
SRR8316900Third green stage 16.238
SRR8316901Third green stage 14.767
SRR8316898Complete white stage 10.322
SRR8316899Complete white stage 22.038
SRR8316903Complete white stage 12.717
SRR8316902Silver flowering stage7.788
SRR8316904Silver flowering stage11.204
SRR8316905Silver flowering stage4.566
SRR8316906Gold flowering stage 18.461
SRR8316907Gold flowering stage 17.183
SRR8316908Gold flowering stage 18.853
SRP132670SRR6706286Control11.492
SRR6706287Light intensity 50%10.965
SRR6706288Light intensity 20%12.525
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.679
CNS0095593Slightly white alabastrum(diploid) 210.045
CNS0095594Slightly white alabastrum(diploid) 36.337
CNS0095595Whole white alabastrum(diploid) 211.543
CNS0095596Whole white alabastrum(diploid) 311.226
CNS0095597Whole white alabastrum(diploid) 48.489
CNS0095598Silvery flower (diploied) 116.724
CNS0095599Silvery flower (diploied) 211.656
CNS0095600Silvery flower (diploied) 315.666
CNS0095601Golden flower (diploid) 110.245
CNS0095602Golden flower (diploid) 213.468
CNS0095603Golden flower (diploid) 315.276
CNS0095604Slightly white alabastrum(tetraploid) 110.005
CNS0095605Slightly white alabastrum(tetraploid) 27.289
CNS0095606Slightly white alabastrum(tetraploid) 311.951
CNS0095607Whole white alabastrum(tetraploid) 19.242
CNS0095608Whole white alabastrum(tetraploid) 27.555
CNS0095609Whole white alabastrum(tetraploid) 312.812
CNS0095610Silvery flower (tetraploid) 116.230
CNS0095611Silvery flower (tetraploid) 216.243
CNS0095612Silvery flower (tetraploid) 314.964
CNS0095613Golden flower (tetraploid) 111.809
CNS0095614Golden flower (tetraploid) 214.154
CNS0095615Golden flower (tetraploid) 313.700
CRA001975CRR073297Stem 116.632
CRR073298Stem 213.503
CRR073299Stem 311.228
CRR073300Leaf 114.772
CRR073301Leaf 216.248
CRR073302Leaf 39.243
CRR073303Juvenile bud 110.368
CRR073304Juvenile bud 28.345
CRR073305Juvenile bud 311.879
CRR073306Third green 13.980
CRR073307Third green 26.484
CRR073308Third green 33.871
CRR073309Second white 15.936
CRR073310Second white 25.622
CRR073311Second white 35.330
CRR073312Silver flowering 14.545
CRR073313Silver flowering 24.526
CRR073314Silver flowering 34.320
CRR073315Gold flowering 19.853
CRR073316Gold flowering 213.765
CRR073317Gold flowering 38.553
CRR073318Tawny withering 111.167
CRR073319Tawny withering 210.346
CRR073320Tawny withering 312.729