Detail information of GWHGAAZE003532


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009760497.15.1419E-103PREDICTED: membrane steroid-binding protein 2-like [Nicotiana sylvestris]
Swissprottr|Q9M2Z4|MSBP2_ARATH5E-80Membrane steroid-binding protein 2
trEMBLtr|A0A067F9Y9|A0A067F9Y9_CITSI7E-102Uncharacterized protein {ECO:0000313|EMBL:KDO60026.1}
TAIR10AT3G48890.12E-64membrane-associated progesterone binding protein 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene9957297399575510-
GWHAAZE00000001mRNA9957297399575510-
GWHAAZE00000001exon9957297399573378-
GWHAAZE00000001exon9957443399574466-
GWHAAZE00000001exon9957522899575510-
GWHAAZE00000001CDS9957522899575510-
GWHAAZE00000001CDS9957443399574466-
GWHAAZE00000001CDS9957297399573378-
Transcript Sequence

Network for GWHGAAZE003532

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0041


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf403.716
SRR3591706second leaf209.506
SRR3591707mature leaf239.407
SRR3591708Shoot apex246.690
SRR3591709Stem650.116
SRR3591710White floral bud534.080
SRR3591711White flower593.095
SRR3591712Green floral bud396.223
SRR3591713Yellow flower568.648
SRP173429 SRR8316895Juvenile bud stage 224.383
SRR8316896Juvenile bud stage 283.076
SRR8316897Juvenile bud stage 121.787
SRR8316894Third green stage 112.740
SRR8316900Third green stage 429.195
SRR8316901Third green stage 388.910
SRR8316898Complete white stage 373.368
SRR8316899Complete white stage 695.053
SRR8316903Complete white stage 477.938
SRR8316902Silver flowering stage416.853
SRR8316904Silver flowering stage476.480
SRR8316905Silver flowering stage290.697
SRR8316906Gold flowering stage 966.730
SRR8316907Gold flowering stage 1079.287
SRR8316908Gold flowering stage 1042.785
SRP132670SRR6706286Control498.300
SRR6706287Light intensity 50%460.773
SRR6706288Light intensity 20%463.702
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1332.801
CNS0095593Slightly white alabastrum(diploid) 2354.152
CNS0095594Slightly white alabastrum(diploid) 3315.932
CNS0095595Whole white alabastrum(diploid) 2337.416
CNS0095596Whole white alabastrum(diploid) 3305.473
CNS0095597Whole white alabastrum(diploid) 4337.231
CNS0095598Silvery flower (diploied) 1727.482
CNS0095599Silvery flower (diploied) 2681.347
CNS0095600Silvery flower (diploied) 31205.004
CNS0095601Golden flower (diploid) 1737.332
CNS0095602Golden flower (diploid) 21140.016
CNS0095603Golden flower (diploid) 31142.368
CNS0095604Slightly white alabastrum(tetraploid) 1268.127
CNS0095605Slightly white alabastrum(tetraploid) 2259.114
CNS0095606Slightly white alabastrum(tetraploid) 3433.895
CNS0095607Whole white alabastrum(tetraploid) 1232.057
CNS0095608Whole white alabastrum(tetraploid) 2214.182
CNS0095609Whole white alabastrum(tetraploid) 3363.101
CNS0095610Silvery flower (tetraploid) 11205.381
CNS0095611Silvery flower (tetraploid) 21552.157
CNS0095612Silvery flower (tetraploid) 31275.005
CNS0095613Golden flower (tetraploid) 11108.006
CNS0095614Golden flower (tetraploid) 21312.065
CNS0095615Golden flower (tetraploid) 31072.519
CRA001975CRR073297Stem 1390.365
CRR073298Stem 2375.199
CRR073299Stem 3476.324
CRR073300Leaf 1472.813
CRR073301Leaf 2488.904
CRR073302Leaf 3538.221
CRR073303Juvenile bud 1803.980
CRR073304Juvenile bud 21016.071
CRR073305Juvenile bud 3838.688
CRR073306Third green 11200.244
CRR073307Third green 21140.136
CRR073308Third green 31064.544
CRR073309Second white 11429.473
CRR073310Second white 2860.503
CRR073311Second white 3729.450
CRR073312Silver flowering 1960.484
CRR073313Silver flowering 21059.135
CRR073314Silver flowering 3763.713
CRR073315Gold flowering 1311.734
CRR073316Gold flowering 2273.888
CRR073317Gold flowering 3369.718
CRR073318Tawny withering 1588.547
CRR073319Tawny withering 2537.246
CRR073320Tawny withering 3489.936