Gene detail

Detail information of GWHGAAZE003589

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_008439282.1	PREDICTED: heat shock protein 83 [Cucumis melo]
COG	YP_003956340.1	chaperone protein HtpG
Swissprot	tr\|P51819\|HSP83_IPONI	Heat shock protein 83
trEMBL	tr\|A0A0A0L6P6\|A0A0A0L6P6_CUCSA	Uncharacterized protein {ECO:0000313\|EMBL:KGN57413.1}
TAIR10	AT5G52640.1	heat shock protein 90.1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	100547929	100550715	+
GWHAAZE00000001	mRNA	100547929	100550715	+
GWHAAZE00000001	exon	100547929	100548208	+
GWHAAZE00000001	exon	100548568	100548848	+
GWHAAZE00000001	exon	100549162	100550715	+
GWHAAZE00000001	CDS	100547929	100548208	+
GWHAAZE00000001	CDS	100548568	100548848	+
GWHAAZE00000001	CDS	100549162	100550715	+

Transcript Sequence
>GWHTAAZE003595 ATGGCTGAAGTTCAGATGGCTGATGCTGAGACCTTTGCTTTCCAGGCTGAGATAAATCAGCTCCTCAGTCTCATCATCAATACTTTCTACAGCAACAAAGAGATCTTCCTTAGGGAACTCATCAGCAATTCTTCTGATGCTTTGGACAAAATTCGTTTCGAGAGCTTGACTGACAAGACCAAACTTGATGCTCAACCCGAGCTCTTCATCAGGATCGTCCCCGATAAAGTTAACAAGACCTTGTCGATTATCGACAGCGGTGTTGGAATGACTAAAGCAGATTTGGTGAACAATCTGGGGACGATTGCAAGATCTGGGACCAAGGAATTCATGGAGGCGTTGCAGGCTGGGGCTGATGTAAGCATGATCGGGCAATTTGGTGTTGGTTTCTATTCTGCGTATCTGGTGGCGGAGAAGGTTATTGTGACCACAAAGCACAATGACGATGAGCAATACGTCTGGGAATCACAAGCTGGTGGTTCATTCACAGTAACAAGGGATGTTAACGGAGAGCCTCTAGGGAGAGGAACCAAAATCACCCTCTTCCTTAAGGAAGATCAGTTGGAATATCTGGAGGAGAGGAGAATTAAGGATCTAGTGAAGAAGCACTCTGAGTTCATCAGCTATCCCATCTATCTCTGGACGGAAAAGACTACTGAGAAAGAGATCAGTGATGACGAGGATGATGAACCCAAGAAGGAAGAGGAGGGTGATGTTGAGGAGGTCGATGAGGAGAAAGAGAAGGACAAGTCCAAGAAAAAGAAAATCAAGGAGGTTTCTCACGAGTGGCAGCTCATTAACAAGCAGAAACCCATCTGGTTGCGCAAACCAGAGGAGATCACTAAGGAAGAATATGCTTCCTTCTACAAGAGCTTAACCAATGATTGGGAGGAACACCTTGCCGTTAAGCACTTCTCTGTTGAAGGTCAGCTTGAATTTAAAGCTATACTCTTCGTACCAAAGAGAGCTCCATTTGATCTTTTTGACACCCGCAAGAAGATGAATAACATCAAACTCTATGTAAGGAGGGTATTTATCATGGACAACTGCGAGGAACTAATCCCAGAGTACCTTGGGTTCGTCAAGGGCGTTGTTGACTCTGATGATTTGCCGCTCAATATATCTCGTGAGACGTTGCAGCAGAACAAGATTCTTAAGGTTATCAGGAAGAACCTTGTGAAGAAATGCATTGAGATGTTCAATGAGATCGCAGAGAACAAGGAGGATTATATGAAGTTCTATGAAGCCTTCTCAAAGAATCTGAAATTGGGCATTCACGAGGACAGCCAAAACAGGTCAAAATTGGCCGATCTTCTCAGATACTACTCAACCAAGAGTGGTGATGATATGACTAGTCTAAAGGATTATGTCACCAGAATGAAAGAGGAGCAGAAGGACATCTATTACATTACTGGTGAGAGCAAGAAGGCTGTCGAGAATTCCCCATTCTTGGAGAGGCTGAAGAAGAAGGGGTATGAAGTCCTATTCATGGTCGATGCCATTGATGAGTATGCTGTTGGGCAATTAAAGGAATATTATGGGAAGAAGCTAGTTTCTGCTACCAAGGAAGGATTGAAGCTGGATGATGAGACTGAAGAAGAAAAGAAGAGGAGGGAGGAGAAAAGGAAGTCCTTTGAGAACCTTTGCAAGACAATGAAGGAAATTCTTGGAGACAAGGTTGAGAAAGTGGTGGTCTCTGACAGAATTGTGGACTCTCCTTGCTGTTTGGTGACTGGAGAGTATGGGTGGACTGCAAACATGGAAAGGATTATGAAGGCTCAGGCATTGAGGGACAGCAGCATGAGCTCATACATGTCTAGCAAGAAGACTATGGAGATCAACCCTGACAATGGGATAATGGAGGAGCTGAGGAAGAGGGCAGAGGCCGACAAGAATGACAAGTCGGTTAAGGATCTGGTGATGCTGCTTTATGAGACTGCATTGCTTACTTCTGGGTTCAGTTTGGATGATCCAAACACGTTTGCTGCCAGGATTCACAGGATGTTGAAGTTGGGGCTGAGCATTGATGAAGAAGAGGGTGCTGAAGATGTTGATATGCCTGTGCTGGAGGAGGAGGAGAGTAATGAGGAGAGCAAGATGGAGGAAGTGGATTGA

Network for GWHGAAZE003589

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02518.27	HATPase_c	32	186	3.00E-14
PF00183.19	HSP90	189	698	1.20E-234

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04079	HSP90A, htpG	Protein processing in endoplasmic reticulum	map04141
		PI3K-Akt signaling pathway	map04151
		Necroptosis	map04217
		NOD-like receptor signaling pathway	map04621
		Antigen processing and presentation	map04612
		Th17 cell differentiation	map04659
		IL-17 signaling pathway	map04657
		Estrogen signaling pathway	map04915
		Progesterone-mediated oocyte maturation	map04914
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006457	biological_process	protein folding
GO:0005524	molecular_function	ATP binding
GO:0051082	molecular_function	unfolded protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.537
	SRR3591706	second leaf	0.238
	SRR3591707	mature leaf	0.232
	SRR3591708	Shoot apex	0.453
	SRR3591709	Stem	1.025
	SRR3591710	White floral bud	0.440
	SRR3591711	White flower	0.598
	SRR3591712	Green floral bud	0.532
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	4.156
	SRR8316896	Juvenile bud stage	80.823
	SRR8316897	Juvenile bud stage	6.441
	SRR8316894	Third green stage	0.275
	SRR8316900	Third green stage	2.095
	SRR8316901	Third green stage	1.696
	SRR8316898	Complete white stage	0.146
	SRR8316899	Complete white stage	1.456
	SRR8316903	Complete white stage	0.690
	SRR8316902	Silver flowering stage	0.213
	SRR8316904	Silver flowering stage	0.228
	SRR8316905	Silver flowering stage	0.159
	SRR8316906	Gold flowering stage	0.556
	SRR8316907	Gold flowering stage	0.437
	SRR8316908	Gold flowering stage	0.164
SRP132670	SRR6706286	Control	3.533
	SRR6706287	Light intensity 50%	2.790
	SRR6706288	Light intensity 20%	3.485
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.137
	CNS0095593	Slightly white alabastrum(diploid) 2	1.389
	CNS0095594	Slightly white alabastrum(diploid) 3	2.356
	CNS0095595	Whole white alabastrum(diploid) 2	1.101
	CNS0095596	Whole white alabastrum(diploid) 3	1.089
	CNS0095597	Whole white alabastrum(diploid) 4	1.620
	CNS0095598	Silvery flower (diploied) 1	1.189
	CNS0095599	Silvery flower (diploied) 2	38.143
	CNS0095600	Silvery flower (diploied) 3	15.747
	CNS0095601	Golden flower (diploid) 1	119.169
	CNS0095602	Golden flower (diploid) 2	12.973
	CNS0095603	Golden flower (diploid) 3	11.744
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.595
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.477
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.520
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.670
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.317
	CNS0095609	Whole white alabastrum(tetraploid) 3	5.394
	CNS0095610	Silvery flower (tetraploid) 1	3.492
	CNS0095611	Silvery flower (tetraploid) 2	3.809
	CNS0095612	Silvery flower (tetraploid) 3	1.733
	CNS0095613	Golden flower (tetraploid) 1	0.984
	CNS0095614	Golden flower (tetraploid) 2	3.706
	CNS0095615	Golden flower (tetraploid) 3	0.269
CRA001975	CRR073297	Stem 1	0.989
	CRR073298	Stem 2	0.775
	CRR073299	Stem 3	1.113
	CRR073300	Leaf 1	3.125
	CRR073301	Leaf 2	2.036
	CRR073302	Leaf 3	1.053
	CRR073303	Juvenile bud 1	5.621
	CRR073304	Juvenile bud 2	1.097
	CRR073305	Juvenile bud 3	5.633
	CRR073306	Third green 1	1.004
	CRR073307	Third green 2	1.350
	CRR073308	Third green 3	1.555
	CRR073309	Second white 1	0.252
	CRR073310	Second white 2	0.304
	CRR073311	Second white 3	0.167
	CRR073312	Silver flowering 1	0.093
	CRR073313	Silver flowering 2	0.332
	CRR073314	Silver flowering 3	0.286
	CRR073315	Gold flowering 1	0.191
	CRR073316	Gold flowering 2	0.171
	CRR073317	Gold flowering 3	1.594
	CRR073318	Tawny withering 1	2.342
	CRR073319	Tawny withering 2	1.716
	CRR073320	Tawny withering 3	3.506