Detail information of GWHGAAZE003645


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010100763.10Histone-lysine N-methyltransferase ATX5 [Morus notabilis]
COGYP_003280830.15E-24nuclear protein SET
Swissprottr|Q8GZ42|ATX5_ARATH3E-175Histone-lysine N-methyltransferase ATX5
trEMBLtr|W9RDT6|W9RDT6_9ROSA0Histone-lysine N-methyltransferase ATX5 {ECO:0000313|EMBL:EXB84230.1}
TAIR10AT5G53430.19E-150SET domain group 29

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene101542569101551648-
GWHAAZE00000001mRNA101542569101551648-
GWHAAZE00000001exon101542569101543139-
GWHAAZE00000001exon101543225101543325-
GWHAAZE00000001exon101543527101543601-
GWHAAZE00000001exon101543725101543811-
GWHAAZE00000001exon101543969101544058-
GWHAAZE00000001exon101544308101544394-
GWHAAZE00000001exon101544895101545102-
GWHAAZE00000001exon101545331101545395-
GWHAAZE00000001exon101545915101545977-
GWHAAZE00000001exon101546129101546274-
GWHAAZE00000001exon101547506101547605-
GWHAAZE00000001exon101548005101548140-
GWHAAZE00000001exon101548580101548669-
GWHAAZE00000001exon101548752101548843-
GWHAAZE00000001exon101550256101550400-
GWHAAZE00000001exon101550483101550538-
GWHAAZE00000001exon101550677101551024-
GWHAAZE00000001exon101551160101551648-
GWHAAZE00000001CDS101551160101551648-
GWHAAZE00000001CDS101550677101551024-
GWHAAZE00000001CDS101550483101550538-
GWHAAZE00000001CDS101550256101550400-
GWHAAZE00000001CDS101548752101548843-
GWHAAZE00000001CDS101548580101548669-
GWHAAZE00000001CDS101548005101548140-
GWHAAZE00000001CDS101547506101547605-
GWHAAZE00000001CDS101546129101546274-
GWHAAZE00000001CDS101545915101545977-
GWHAAZE00000001CDS101545331101545395-
GWHAAZE00000001CDS101544895101545102-
GWHAAZE00000001CDS101544308101544394-
GWHAAZE00000001CDS101543969101544058-
GWHAAZE00000001CDS101543725101543811-
GWHAAZE00000001CDS101543527101543601-
GWHAAZE00000001CDS101543225101543325-
GWHAAZE00000001CDS101543049101543139-
GWHAAZE00000001three_prime_UTR101542569101543048-
Transcript Sequence

Network for GWHGAAZE003645

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00855.18PWWP2243218.50E-14
PF13832.7zf-HC5HC2H_24845761.90E-12
PF00856.29SET6917961.40E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilySET

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.104
SRR3591706second leaf9.506
SRR3591707mature leaf10.066
SRR3591708Shoot apex11.993
SRR3591709Stem11.080
SRR3591710White floral bud15.900
SRR3591711White flower15.570
SRR3591712Green floral bud13.986
SRR3591713Yellow flower10.734
SRP173429 SRR8316895Juvenile bud stage 7.975
SRR8316896Juvenile bud stage 13.426
SRR8316897Juvenile bud stage 4.861
SRR8316894Third green stage 5.932
SRR8316900Third green stage 12.115
SRR8316901Third green stage 12.524
SRR8316898Complete white stage 4.717
SRR8316899Complete white stage 14.398
SRR8316903Complete white stage 9.280
SRR8316902Silver flowering stage5.025
SRR8316904Silver flowering stage7.709
SRR8316905Silver flowering stage3.241
SRR8316906Gold flowering stage 9.927
SRR8316907Gold flowering stage 10.516
SRR8316908Gold flowering stage 9.967
SRP132670SRR6706286Control11.412
SRR6706287Light intensity 50%11.908
SRR6706288Light intensity 20%13.128
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.563
CNS0095593Slightly white alabastrum(diploid) 27.725
CNS0095594Slightly white alabastrum(diploid) 38.664
CNS0095595Whole white alabastrum(diploid) 29.227
CNS0095596Whole white alabastrum(diploid) 38.559
CNS0095597Whole white alabastrum(diploid) 48.631
CNS0095598Silvery flower (diploied) 18.181
CNS0095599Silvery flower (diploied) 26.410
CNS0095600Silvery flower (diploied) 39.499
CNS0095601Golden flower (diploid) 17.194
CNS0095602Golden flower (diploid) 27.804
CNS0095603Golden flower (diploid) 37.279
CNS0095604Slightly white alabastrum(tetraploid) 19.642
CNS0095605Slightly white alabastrum(tetraploid) 29.789
CNS0095606Slightly white alabastrum(tetraploid) 312.695
CNS0095607Whole white alabastrum(tetraploid) 18.481
CNS0095608Whole white alabastrum(tetraploid) 29.034
CNS0095609Whole white alabastrum(tetraploid) 310.061
CNS0095610Silvery flower (tetraploid) 110.038
CNS0095611Silvery flower (tetraploid) 28.674
CNS0095612Silvery flower (tetraploid) 39.889
CNS0095613Golden flower (tetraploid) 15.042
CNS0095614Golden flower (tetraploid) 26.746
CNS0095615Golden flower (tetraploid) 37.531
CRA001975CRR073297Stem 112.762
CRR073298Stem 210.932
CRR073299Stem 38.866
CRR073300Leaf 113.033
CRR073301Leaf 210.100
CRR073302Leaf 39.361
CRR073303Juvenile bud 17.845
CRR073304Juvenile bud 25.180
CRR073305Juvenile bud 311.266
CRR073306Third green 14.035
CRR073307Third green 23.496
CRR073308Third green 33.851
CRR073309Second white 13.820
CRR073310Second white 24.639
CRR073311Second white 35.294
CRR073312Silver flowering 15.158
CRR073313Silver flowering 24.088
CRR073314Silver flowering 33.348
CRR073315Gold flowering 15.595
CRR073316Gold flowering 210.062
CRR073317Gold flowering 35.228
CRR073318Tawny withering 15.665
CRR073319Tawny withering 25.442
CRR073320Tawny withering 35.997