Detail information of GWHGAAZE003687


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002272297.11.44817E-30PREDICTED: nephrocystin-3 isoform X1 [Vitis vinifera]
trEMBLtr|E0CV63|E0CV63_VITVI9E-31Putative uncharacterized protein {ECO:0000313|EMBL:CBI23024.3}
TAIR10AT5G53080.11E-11Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene102177619102178263-
GWHAAZE00000001mRNA102177619102178263-
GWHAAZE00000001exon102177619102177823-
GWHAAZE00000001exon102177902102177931-
GWHAAZE00000001exon102178004102178263-
GWHAAZE00000001CDS102178004102178263-
GWHAAZE00000001CDS102177902102177931-
GWHAAZE00000001CDS102177619102177823-
Transcript Sequence

Network for GWHGAAZE003687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0019


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.823
SRR3591706second leaf0.835
SRR3591707mature leaf0.918
SRR3591708Shoot apex4.182
SRR3591709Stem4.049
SRR3591710White floral bud1.889
SRR3591711White flower4.095
SRR3591712Green floral bud3.174
SRR3591713Yellow flower1.838
SRP173429 SRR8316895Juvenile bud stage 0.823
SRR8316896Juvenile bud stage 0.959
SRR8316897Juvenile bud stage 0.588
SRR8316894Third green stage 0.679
SRR8316900Third green stage 2.215
SRR8316901Third green stage 1.253
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.592
SRR8316903Complete white stage 0.516
SRR8316902Silver flowering stage0.553
SRR8316904Silver flowering stage0.013
SRR8316905Silver flowering stage0.069
SRR8316906Gold flowering stage 0.466
SRR8316907Gold flowering stage 0.120
SRR8316908Gold flowering stage 0.380
SRP132670SRR6706286Control0.054
SRR6706287Light intensity 50%0.018
SRR6706288Light intensity 20%0.067
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.577
CNS0095593Slightly white alabastrum(diploid) 21.024
CNS0095594Slightly white alabastrum(diploid) 30.624
CNS0095595Whole white alabastrum(diploid) 20.255
CNS0095596Whole white alabastrum(diploid) 30.380
CNS0095597Whole white alabastrum(diploid) 41.052
CNS0095598Silvery flower (diploied) 12.324
CNS0095599Silvery flower (diploied) 21.227
CNS0095600Silvery flower (diploied) 30.224
CNS0095601Golden flower (diploid) 10.504
CNS0095602Golden flower (diploid) 20.404
CNS0095603Golden flower (diploid) 30.318
CNS0095604Slightly white alabastrum(tetraploid) 11.465
CNS0095605Slightly white alabastrum(tetraploid) 21.127
CNS0095606Slightly white alabastrum(tetraploid) 31.908
CNS0095607Whole white alabastrum(tetraploid) 10.658
CNS0095608Whole white alabastrum(tetraploid) 20.147
CNS0095609Whole white alabastrum(tetraploid) 30.904
CNS0095610Silvery flower (tetraploid) 11.566
CNS0095611Silvery flower (tetraploid) 21.849
CNS0095612Silvery flower (tetraploid) 30.254
CNS0095613Golden flower (tetraploid) 10.652
CNS0095614Golden flower (tetraploid) 20.581
CNS0095615Golden flower (tetraploid) 30.202
CRA001975CRR073297Stem 10.649
CRR073298Stem 20.329
CRR073299Stem 30.000
CRR073300Leaf 10.221
CRR073301Leaf 20.454
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.019
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.001
CRR073306Third green 10.000
CRR073307Third green 20.011
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.153
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.233
CRR073320Tawny withering 30.053