Detail information of GWHGAAZE003704


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU19677.17.80126E-68hypothetical protein MIMGU_mgv1a016108mg [Erythranthe guttata]
Swissprottr|Q42342|CYB5E_ARATH5E-59Cytochrome b5 isoform E {ECO:0000303|PubMed:19054355}
trEMBLtr|K7KUV3|K7KUV3_SOYBN1E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13840.5}
TAIR10AT5G53560.17E-47cytochrome B5 isoform E

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene102544359102546396+
GWHAAZE00000001mRNA102544359102546396+
GWHAAZE00000001exon102544359102544394+
GWHAAZE00000001exon102545939102546005+
GWHAAZE00000001exon102546137102546396+
GWHAAZE00000001CDS102544359102544394+
GWHAAZE00000001CDS102545939102546005+
GWHAAZE00000001CDS102546137102546396+
Transcript Sequence

Network for GWHGAAZE003704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.29Cyt-b512631.30E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf347.964
SRR3591706second leaf170.377
SRR3591707mature leaf140.234
SRR3591708Shoot apex277.115
SRR3591709Stem318.891
SRR3591710White floral bud233.645
SRR3591711White flower287.863
SRR3591712Green floral bud226.283
SRR3591713Yellow flower281.094
SRP173429 SRR8316895Juvenile bud stage 166.051
SRR8316896Juvenile bud stage 225.711
SRR8316897Juvenile bud stage 102.598
SRR8316894Third green stage 93.009
SRR8316900Third green stage 292.123
SRR8316901Third green stage 255.833
SRR8316898Complete white stage 136.136
SRR8316899Complete white stage 391.986
SRR8316903Complete white stage 200.970
SRR8316902Silver flowering stage139.147
SRR8316904Silver flowering stage164.362
SRR8316905Silver flowering stage86.583
SRR8316906Gold flowering stage 302.718
SRR8316907Gold flowering stage 304.119
SRR8316908Gold flowering stage 312.905
SRP132670SRR6706286Control209.619
SRR6706287Light intensity 50%250.647
SRR6706288Light intensity 20%265.478
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1239.475
CNS0095593Slightly white alabastrum(diploid) 2266.079
CNS0095594Slightly white alabastrum(diploid) 3233.650
CNS0095595Whole white alabastrum(diploid) 2203.722
CNS0095596Whole white alabastrum(diploid) 3187.782
CNS0095597Whole white alabastrum(diploid) 4175.134
CNS0095598Silvery flower (diploied) 1255.550
CNS0095599Silvery flower (diploied) 2250.631
CNS0095600Silvery flower (diploied) 3400.368
CNS0095601Golden flower (diploid) 1267.176
CNS0095602Golden flower (diploid) 2355.759
CNS0095603Golden flower (diploid) 3353.881
CNS0095604Slightly white alabastrum(tetraploid) 1234.800
CNS0095605Slightly white alabastrum(tetraploid) 2230.855
CNS0095606Slightly white alabastrum(tetraploid) 3339.124
CNS0095607Whole white alabastrum(tetraploid) 1164.868
CNS0095608Whole white alabastrum(tetraploid) 2129.249
CNS0095609Whole white alabastrum(tetraploid) 3255.476
CNS0095610Silvery flower (tetraploid) 1378.223
CNS0095611Silvery flower (tetraploid) 2435.246
CNS0095612Silvery flower (tetraploid) 3493.048
CNS0095613Golden flower (tetraploid) 1330.848
CNS0095614Golden flower (tetraploid) 2385.100
CNS0095615Golden flower (tetraploid) 3356.593
CRA001975CRR073297Stem 1370.163
CRR073298Stem 2358.719
CRR073299Stem 3382.500
CRR073300Leaf 1339.099
CRR073301Leaf 2329.876
CRR073302Leaf 3384.663
CRR073303Juvenile bud 1357.272
CRR073304Juvenile bud 2343.562
CRR073305Juvenile bud 3368.917
CRR073306Third green 1327.745
CRR073307Third green 2340.258
CRR073308Third green 3319.032
CRR073309Second white 1462.986
CRR073310Second white 2349.154
CRR073311Second white 3277.855
CRR073312Silver flowering 1369.814
CRR073313Silver flowering 2395.570
CRR073314Silver flowering 3259.741
CRR073315Gold flowering 1209.240
CRR073316Gold flowering 2255.789
CRR073317Gold flowering 3223.302
CRR073318Tawny withering 1475.820
CRR073319Tawny withering 2497.140
CRR073320Tawny withering 3450.159