Detail information of GWHGAAZE003721


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADN27527.10caffeic acid O-methyltransferase [Camellia sinensis]
COGYP_007063273.15E-32hydroxyneurosporene-O-methyltransferase
Swissprottr|Q8LL87|COMT1_COFCA2E-180Caffeic acid 3-O-methyltransferase
trEMBLtr|E2FYC3|E2FYC3_CAMSI0Caffeic acid O-methyltransferase {ECO:0000313|EMBL:ADN27527.1}
TAIR10AT5G54160.16E-132O-methyltransferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene102867219102871011-
GWHAAZE00000001mRNA102867219102871011-
GWHAAZE00000001exon102870548102871011-
GWHAAZE00000001exon102867991102868301-
GWHAAZE00000001exon102867710102867774-
GWHAAZE00000001exon102867219102867485-
GWHAAZE00000001CDS102870548102871011-
GWHAAZE00000001CDS102867991102868301-
GWHAAZE00000001CDS102867710102867774-
GWHAAZE00000001CDS102867219102867485-
Transcript Sequence

Network for GWHGAAZE003721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08100.12Dimerisation42949.20E-20
PF00891.19Methyltransf_21553508.80E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13066E2.1.1.68, COMT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity
GO:0008168molecular_functionmethyltransferase activity
GO:0008171molecular_functionO-methyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.713
SRR3591706second leaf3.969
SRR3591707mature leaf0.000
SRR3591708Shoot apex37.658
SRR3591709Stem0.838
SRR3591710White floral bud2.150
SRR3591711White flower0.184
SRR3591712Green floral bud8.404
SRR3591713Yellow flower1.106
SRP173429 SRR8316895Juvenile bud stage 10.113
SRR8316896Juvenile bud stage 12.172
SRR8316897Juvenile bud stage 23.601
SRR8316894Third green stage 4.627
SRR8316900Third green stage 13.681
SRR8316901Third green stage 13.605
SRR8316898Complete white stage 0.763
SRR8316899Complete white stage 5.223
SRR8316903Complete white stage 1.738
SRR8316902Silver flowering stage0.116
SRR8316904Silver flowering stage0.031
SRR8316905Silver flowering stage0.055
SRR8316906Gold flowering stage 0.286
SRR8316907Gold flowering stage 0.164
SRR8316908Gold flowering stage 0.838
SRP132670SRR6706286Control12.671
SRR6706287Light intensity 50%12.153
SRR6706288Light intensity 20%13.265
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.100
CNS0095593Slightly white alabastrum(diploid) 219.617
CNS0095594Slightly white alabastrum(diploid) 317.990
CNS0095595Whole white alabastrum(diploid) 216.230
CNS0095596Whole white alabastrum(diploid) 311.874
CNS0095597Whole white alabastrum(diploid) 49.955
CNS0095598Silvery flower (diploied) 12.054
CNS0095599Silvery flower (diploied) 22.765
CNS0095600Silvery flower (diploied) 32.050
CNS0095601Golden flower (diploid) 10.425
CNS0095602Golden flower (diploid) 20.270
CNS0095603Golden flower (diploid) 30.601
CNS0095604Slightly white alabastrum(tetraploid) 110.673
CNS0095605Slightly white alabastrum(tetraploid) 29.753
CNS0095606Slightly white alabastrum(tetraploid) 312.372
CNS0095607Whole white alabastrum(tetraploid) 18.957
CNS0095608Whole white alabastrum(tetraploid) 212.555
CNS0095609Whole white alabastrum(tetraploid) 38.186
CNS0095610Silvery flower (tetraploid) 10.627
CNS0095611Silvery flower (tetraploid) 20.341
CNS0095612Silvery flower (tetraploid) 30.644
CNS0095613Golden flower (tetraploid) 10.615
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 128.424
CRR073298Stem 224.502
CRR073299Stem 321.536
CRR073300Leaf 113.587
CRR073301Leaf 223.479
CRR073302Leaf 321.449
CRR073303Juvenile bud 16.317
CRR073304Juvenile bud 20.432
CRR073305Juvenile bud 37.655
CRR073306Third green 11.507
CRR073307Third green 20.958
CRR073308Third green 30.373
CRR073309Second white 10.276
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.077
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.097
CRR073316Gold flowering 20.072
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.246
CRR073320Tawny withering 30.180