Gene detail

Detail information of GWHGAAZE003792

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007049044.1	0	Cytochrome P450 97B2, chloroplastic isoform 2 [Theobroma cacao]
COG	YP_630524.1	6E-63	cytochrome P450 family protein
Swissprot	tr\|O48921\|C97B2_SOYBN	0	Cytochrome P450 97B2, chloroplastic (Precursor)
trEMBL	tr\|A0A061DMD2\|A0A061DMD2_THECC	0	Cytochrome P450 97B2, chloroplastic isoform 2 {ECO:0000313\|EMBL:EOX93201.1}
TAIR10	AT4G15110.1	0	cytochrome P450, family 97, subfamily B, polypeptide 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	104379356	104390723	+
GWHAAZE00000001	mRNA	104379356	104390723	+
GWHAAZE00000001	exon	104379356	104379661	+
GWHAAZE00000001	exon	104382990	104383097	+
GWHAAZE00000001	exon	104383565	104383649	+
GWHAAZE00000001	exon	104385833	104386056	+
GWHAAZE00000001	exon	104386331	104386504	+
GWHAAZE00000001	exon	104387103	104387150	+
GWHAAZE00000001	exon	104387312	104387371	+
GWHAAZE00000001	exon	104387454	104387540	+
GWHAAZE00000001	exon	104387678	104387766	+
GWHAAZE00000001	exon	104388636	104388727	+
GWHAAZE00000001	exon	104389266	104389327	+
GWHAAZE00000001	exon	104389699	104389848	+
GWHAAZE00000001	exon	104390249	104390723	+
GWHAAZE00000001	CDS	104379356	104379661	+
GWHAAZE00000001	CDS	104382990	104383097	+
GWHAAZE00000001	CDS	104383565	104383649	+
GWHAAZE00000001	CDS	104385833	104386056	+
GWHAAZE00000001	CDS	104386331	104386504	+
GWHAAZE00000001	CDS	104387103	104387150	+
GWHAAZE00000001	CDS	104387312	104387371	+
GWHAAZE00000001	CDS	104387454	104387540	+
GWHAAZE00000001	CDS	104387678	104387766	+
GWHAAZE00000001	CDS	104388636	104388727	+
GWHAAZE00000001	CDS	104389266	104389327	+
GWHAAZE00000001	CDS	104389699	104389848	+
GWHAAZE00000001	CDS	104390249	104390476	+
GWHAAZE00000001	three_prime_UTR	104390477	104390723	+

Transcript Sequence
>GWHTAAZE003798 GCGGAGGATCTTATCGAACCAGGTACCTTACCCAGAATCTCATTCCTCTCTCTATCTGCCCACTCATCTAAATTAATTGGGACTAGTTTCAGATGCCAATCCACGAGGAGTACGGATACGGAGGTGGTGGAGGAAGAAAAAAAAGGGAAAAGGAGGACGATGAATTTAATGGACAACGCGAGCAATTTACTTACTAATTTGTTAAATGGTGGAAGCAATCTAGATTCTATGCCTACTGCTGAAGGTGCTGTTTCTGATCTTTTTGGCAAGCCTCTCTTCTTCTCACTCTACGATTGGTTCTTGGAGCATGGTTCTGTGTATAAACTAGCTTTTGGGCCTAAAGCATTCGTTGTCGTATCAGATCCCATTGTTGCGAGGCATATTCTTCGTGAAAATGCATTTTCTTATGACAAGGGAGTTCTTGCTGATATTCTAGAACCAATAATGGGAAAAGGACTTATACCAGCCGACCTCGACACTTGGAAGCTAAGGAGAAGAGTTATTGCTCCTGGGTTCCATTCCTTATACTTAGAAACCATGGTCAAATTGTTTACTGAGTGTTCTGAAAGAACAATATTGAAATTCGAGAAGCTTTTAGAAGGAGGGAAAGCAATTGAGTTGGATCTTGAAGCAGAATTTTCAAGTTTGGCACTCGACATAATTGGGCTGGGTGTTTTCAACTATGACTTTGGTTCTGTAACAAAAGAATCTCCCGTGATAAAGGCAGTATATGGTACTCTTTTTGAAGCTGAGCATAGATCTACTTTCTACATTCCTTATTGGAAAGTTCCTCTGGCACGATGGCTAGTTCCTAGGCAGCGAAAGTTCCGGAATGATCTTAAGGTTATTAACGACTGTCTTGATGGTCTCATCAGAAATGCAAAAGAGACCAGGCAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGACTACTTAAATCTTAAGGATGCAAGTCTTTTGCGATTTTTGGTTGATATGAGGGGAGCTGATGTTGATGATCGTCAACTAAGAGATGACCTGATGACGATGCTTATTGCTGGCCATGAAACAACAGCTGCTGTCCTTACTTGGGCGACTTTCCTGCTAGCGCAACATCCTGCCAAAATGAAGAAAGCCCAGTCAGAGATAGATTCGGTGCTCGGTCAGGGGAGAACAACATTTGAATCATTGAAAAAATTAGAGTACTTGAGACTTATTGTTGTGGAGACTCTGCGGTTGTATCCTCAGCCTCCATTGCTTATTAGACGCGCCCTCAGACCGGATTCATTGCCAGGAGGCTATATGGGTAACAAAGATGGATATGCAATTCCAGATGGCACCGATATCTTTATTTCTGTATATAATCTCCATAGATCTCCATATTTTTGGGACAAACCTGATGATTTTGAACCAGAGAGGTTTCTAGTGGAAAAAAAGAGCGAAGGAATTGAAGGGTGGGCTGGTTTCGATCCATCTCGAAGCCCCGGAGCATTATACCCAAATGAGATTATATCGGATTTTGCATTCTTGCCTTTTGGGGGAGGGCCAAGAAAGTGCGTGGGAGACCAATTCGCACTGATGGAATCAACTGTAGCATTGGCTATGTTGTTACAGAAGTTTGATGTGGAGCTTAAAGGAACTCCGGAGTCTGTGGAACTTGTTACTGGGGCTACCATTCACACAAAGAATGGACTGTGGTGCAATTTGAAGAAGAGATCCAGTGCGGTTCATTGAAGCGCCAAGAGAGGTTAAAACATGTTTCCATTGATGTTGTGAAGTTTTGTATAATCTTCTTTATCCATATATACTTTCATCAACAATGGAATCGGGAACATTATCGTAAACATGTGTTACAGAGGAACAGAAAATAGTGAAGACAGGCTCGACAAAGTGTTGCCTCGTGTTTTTGGCAACATTTTTCCGGTTAAACTACAATTTTCATTTTGTGGAAAATAGTTTCAAAATCATGGTTACAGTCGTA

Network for GWHGAAZE003792

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	99	559	8.20E-83

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	20.919
	SRR3591706	second leaf	46.359
	SRR3591707	mature leaf	39.417
	SRR3591708	Shoot apex	41.827
	SRR3591709	Stem	16.611
	SRR3591710	White floral bud	20.757
	SRR3591711	White flower	19.176
	SRR3591712	Green floral bud	17.843
	SRR3591713	Yellow flower	18.258
SRP173429	SRR8316895	Juvenile bud stage	14.078
	SRR8316896	Juvenile bud stage	18.894
	SRR8316897	Juvenile bud stage	10.253
	SRR8316894	Third green stage	7.896
	SRR8316900	Third green stage	25.335
	SRR8316901	Third green stage	21.352
	SRR8316898	Complete white stage	8.462
	SRR8316899	Complete white stage	18.765
	SRR8316903	Complete white stage	11.559
	SRR8316902	Silver flowering stage	9.722
	SRR8316904	Silver flowering stage	11.371
	SRR8316905	Silver flowering stage	7.616
	SRR8316906	Gold flowering stage	15.700
	SRR8316907	Gold flowering stage	13.442
	SRR8316908	Gold flowering stage	18.611
SRP132670	SRR6706286	Control	17.895
	SRR6706287	Light intensity 50%	19.008
	SRR6706288	Light intensity 20%	20.831
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	10.366
	CNS0095593	Slightly white alabastrum(diploid) 2	9.714
	CNS0095594	Slightly white alabastrum(diploid) 3	9.015
	CNS0095595	Whole white alabastrum(diploid) 2	10.165
	CNS0095596	Whole white alabastrum(diploid) 3	11.775
	CNS0095597	Whole white alabastrum(diploid) 4	7.948
	CNS0095598	Silvery flower (diploied) 1	20.498
	CNS0095599	Silvery flower (diploied) 2	15.477
	CNS0095600	Silvery flower (diploied) 3	16.444
	CNS0095601	Golden flower (diploid) 1	15.118
	CNS0095602	Golden flower (diploid) 2	10.596
	CNS0095603	Golden flower (diploid) 3	10.849
	CNS0095604	Slightly white alabastrum(tetraploid) 1	14.002
	CNS0095605	Slightly white alabastrum(tetraploid) 2	13.356
	CNS0095606	Slightly white alabastrum(tetraploid) 3	24.786
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.075
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.164
	CNS0095609	Whole white alabastrum(tetraploid) 3	20.818
	CNS0095610	Silvery flower (tetraploid) 1	19.540
	CNS0095611	Silvery flower (tetraploid) 2	25.370
	CNS0095612	Silvery flower (tetraploid) 3	26.718
	CNS0095613	Golden flower (tetraploid) 1	12.490
	CNS0095614	Golden flower (tetraploid) 2	17.004
	CNS0095615	Golden flower (tetraploid) 3	11.528
CRA001975	CRR073297	Stem 1	18.820
	CRR073298	Stem 2	17.309
	CRR073299	Stem 3	10.044
	CRR073300	Leaf 1	12.666
	CRR073301	Leaf 2	14.135
	CRR073302	Leaf 3	10.748
	CRR073303	Juvenile bud 1	10.191
	CRR073304	Juvenile bud 2	8.828
	CRR073305	Juvenile bud 3	7.735
	CRR073306	Third green 1	9.624
	CRR073307	Third green 2	4.198
	CRR073308	Third green 3	5.518
	CRR073309	Second white 1	7.097
	CRR073310	Second white 2	5.767
	CRR073311	Second white 3	5.335
	CRR073312	Silver flowering 1	2.875
	CRR073313	Silver flowering 2	2.839
	CRR073314	Silver flowering 3	2.527
	CRR073315	Gold flowering 1	25.849
	CRR073316	Gold flowering 2	34.182
	CRR073317	Gold flowering 3	14.158
	CRR073318	Tawny withering 1	5.279
	CRR073319	Tawny withering 2	5.372
	CRR073320	Tawny withering 3	5.091