Gene detail

Detail information of GWHGAAZE003820

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_010654150.1	PREDICTED: exocyst complex component EXO70A1 isoform X1 [Vitis vinifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	Exocyst complex component EXO70A1
trEMBL	tr\|D7TH66\|D7TH66_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI30382.3}
TAIR10	AT5G52340.1	exocyst subunit exo70 family protein A2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	105098996	105116967	-
GWHAAZE00000001	mRNA	105098996	105116967	-
GWHAAZE00000001	exon	105098996	105099113	-
GWHAAZE00000001	exon	105100308	105100519	-
GWHAAZE00000001	exon	105104106	105104205	-
GWHAAZE00000001	exon	105105747	105105944	-
GWHAAZE00000001	exon	105107482	105107687	-
GWHAAZE00000001	exon	105108049	105108261	-
GWHAAZE00000001	exon	105108455	105108593	-
GWHAAZE00000001	exon	105112508	105112717	-
GWHAAZE00000001	exon	105114200	105114237	-
GWHAAZE00000001	exon	105115933	105116028	-
GWHAAZE00000001	exon	105116804	105116967	-
GWHAAZE00000001	five_prime_UTR	105116945	105116967	-
GWHAAZE00000001	CDS	105116804	105116944	-
GWHAAZE00000001	CDS	105115933	105116028	-
GWHAAZE00000001	CDS	105114200	105114237	-
GWHAAZE00000001	CDS	105112508	105112717	-
GWHAAZE00000001	CDS	105108455	105108593	-
GWHAAZE00000001	CDS	105108049	105108261	-
GWHAAZE00000001	CDS	105107482	105107687	-
GWHAAZE00000001	CDS	105105747	105105944	-
GWHAAZE00000001	CDS	105104106	105104205	-
GWHAAZE00000001	CDS	105100308	105100519	-
GWHAAZE00000001	CDS	105098996	105099113	-

Transcript Sequence
>GWHTAAZE003826 TCAATGATAATAGTAATCTCAACATGGAAACCCTAAGTGAGAGGGCAGCATTCATGAGTGAATCCCTTCAAAAGAGCCAAATTATAAATGATCAGGTCGTCGCAATTCTCGGCTCCTTCGATCACCGTCTCTCCGCCCTTGAAACCGCTATGCGTCCCACTCAGATAAGAACGCATTCAATTCGGAGGGCACACGAGAACATTGATAAGACTCTCAAGGCTGCTGATTTGGTTTTGGGCCAATTCGATCTTGCTCGCAAGTTCCATCTGGCTTTGAACTGTAGGATGGTAAATGCTTGTAAACCTGTTGAACCAGATCGTCTAATTGAATGCCTACCAAGTTCAATGCGACCATCATCAGCAGGATCAGATCCTAGTCATGGTGGTGATGCTGGTGGAAGAAAATCATCTTCAGAAAACCCAAGTAAATTAGAAACTGTTGTACCTCAACCTCCCACTCTCATTCCACCCAGAATTGTACCATTGCTGCATGATTTAGCGATACAAATGGAAATTCGTGCTGCAGTCGTTGAACAGAGCCTCAGAAAACTAGAGGTAGAAAGACTTAATAAAGATGATGTTCAAAAGATGCAGTGGGAGGTTTTGGAGGCTAAGATTGGGAATTGGATTCACTCCATGCGAATTGCTGTGAAATTGCTATTTGCTGCGGAAAAGAAACTTTGTGATCAAGTTTTTGAGGGAATTGATTCTCTGAGGGATCAATGCTTTGCGGAAGTTAACTCAAACAGTGTAGCTGTGCTCCTTAGCTTTGGAGAGGCTATTGCCAGAAGTAAGAGGTCGCCTGAAAAATTATTTGTACTTCTCGACATGTACGAGATAATGAGAGAACTTCAGCCAGAGTTTGATACAATTTTCGGAAGTAAATATTGTGGTGAAATGCGTGAAGCAGCGTTGGTTTTGACAAAGCGTTTAGCCCAGACAGCTCAAGAGACTTTTGGTGATTTTGAAGAAGCTGTTGAGAAAGATGCCACAAAAACTGCTGTTCTTGATGGAACTGTCCACCCTCTGACCAGCTATGTAATTAATTATGTCAAGTTTTTGTTTGACTACCAATCCACTTTGAAGCAACTATTCAAAGAGTTTGACAACAGTGATCCAGATGCACAGTTGGGATCTGTAACAACGCGGATAATGCAGGCTCTTCAGACAAATCTTGAGGGGAAATCAAAGCAATATAGGGATGCTGCTTTGACTCAGTTATTTTTAATGAACAACATACACTACATTGTCAGATCTGTGCGAAGGTCAGAAGCAAAGGATTTACTCGGGGATGACTGGGTACAAATACATCGAAGGGTTGTGCAGCAGCATGCCAACCAGTATAAGAGGCTTTCTTGGTCAAAGATTCTGCAGTGTCTATCAATCCAGGGTATTTCAGGTGCCGATGGTGGGGGAACTAGTGGTGTTTCGAGGGCAAACGTGAAAGAACGTTTCAAGACGTTCAATGTACAGTTTGAGGAACTTCATCAAAGGCAATCTCAATGGACTGTCCCTGACAGTGAGTTGCGGGAGTCTTTGAGGCTCGCCGTTGCCGAAGTCCTTTTGCCTGCTTACAGGCCTCTGGTGGATAGTGGAAAAAACCCAAACAAGTACATAAGATTTAGTCCGGAGGATCTTGAACGTATGCTTGCCGAGTTTTTTGAAGGCAAAACCTGGAATGATCCCAAACGCTAA

Network for GWHGAAZE003820

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	200	544	2.40E-121

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.974
	SRR3591706	second leaf	11.028
	SRR3591707	mature leaf	6.595
	SRR3591708	Shoot apex	13.012
	SRR3591709	Stem	16.516
	SRR3591710	White floral bud	4.844
	SRR3591711	White flower	2.263
	SRR3591712	Green floral bud	8.744
	SRR3591713	Yellow flower	1.484
SRP173429	SRR8316895	Juvenile bud stage	12.827
	SRR8316896	Juvenile bud stage	14.012
	SRR8316897	Juvenile bud stage	8.373
	SRR8316894	Third green stage	4.593
	SRR8316900	Third green stage	12.089
	SRR8316901	Third green stage	10.996
	SRR8316898	Complete white stage	1.367
	SRR8316899	Complete white stage	3.914
	SRR8316903	Complete white stage	2.572
	SRR8316902	Silver flowering stage	0.951
	SRR8316904	Silver flowering stage	1.443
	SRR8316905	Silver flowering stage	0.755
	SRR8316906	Gold flowering stage	1.808
	SRR8316907	Gold flowering stage	1.298
	SRR8316908	Gold flowering stage	3.837
SRP132670	SRR6706286	Control	5.039
	SRR6706287	Light intensity 50%	5.689
	SRR6706288	Light intensity 20%	5.150
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.711
	CNS0095593	Slightly white alabastrum(diploid) 2	5.959
	CNS0095594	Slightly white alabastrum(diploid) 3	10.926
	CNS0095595	Whole white alabastrum(diploid) 2	5.884
	CNS0095596	Whole white alabastrum(diploid) 3	8.455
	CNS0095597	Whole white alabastrum(diploid) 4	6.909
	CNS0095598	Silvery flower (diploied) 1	4.090
	CNS0095599	Silvery flower (diploied) 2	2.471
	CNS0095600	Silvery flower (diploied) 3	2.700
	CNS0095601	Golden flower (diploid) 1	4.170
	CNS0095602	Golden flower (diploid) 2	2.543
	CNS0095603	Golden flower (diploid) 3	2.048
	CNS0095604	Slightly white alabastrum(tetraploid) 1	11.114
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.298
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.889
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.897
	CNS0095608	Whole white alabastrum(tetraploid) 2	11.593
	CNS0095609	Whole white alabastrum(tetraploid) 3	10.059
	CNS0095610	Silvery flower (tetraploid) 1	0.679
	CNS0095611	Silvery flower (tetraploid) 2	0.640
	CNS0095612	Silvery flower (tetraploid) 3	1.033
	CNS0095613	Golden flower (tetraploid) 1	0.527
	CNS0095614	Golden flower (tetraploid) 2	0.201
	CNS0095615	Golden flower (tetraploid) 3	0.472
CRA001975	CRR073297	Stem 1	16.917
	CRR073298	Stem 2	10.357
	CRR073299	Stem 3	9.598
	CRR073300	Leaf 1	4.785
	CRR073301	Leaf 2	5.083
	CRR073302	Leaf 3	5.652
	CRR073303	Juvenile bud 1	3.968
	CRR073304	Juvenile bud 2	3.217
	CRR073305	Juvenile bud 3	1.328
	CRR073306	Third green 1	1.112
	CRR073307	Third green 2	1.326
	CRR073308	Third green 3	1.316
	CRR073309	Second white 1	0.082
	CRR073310	Second white 2	0.497
	CRR073311	Second white 3	0.989
	CRR073312	Silver flowering 1	0.695
	CRR073313	Silver flowering 2	0.571
	CRR073314	Silver flowering 3	1.131
	CRR073315	Gold flowering 1	2.946
	CRR073316	Gold flowering 2	4.704
	CRR073317	Gold flowering 3	3.081
	CRR073318	Tawny withering 1	4.904
	CRR073319	Tawny withering 2	2.676
	CRR073320	Tawny withering 3	7.834