Gene detail

Detail information of GWHGAAZE003840

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011082152.1	2.6558E-103	PREDICTED: protein notum homolog isoform X2 [Sesamum indicum]
trEMBL	tr\|B3V945\|B3V945_LITCN	4E-103	PAE {ECO:0000313\|EMBL:ACF05806.1}
TAIR10	AT4G19420.1	1E-73	Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	105537699	105545289	-
GWHAAZE00000001	mRNA	105537699	105545289	-
GWHAAZE00000001	exon	105537699	105537839	-
GWHAAZE00000001	exon	105538268	105538389	-
GWHAAZE00000001	exon	105538545	105538650	-
GWHAAZE00000001	exon	105539212	105539289	-
GWHAAZE00000001	exon	105539397	105539450	-
GWHAAZE00000001	exon	105539606	105539666	-
GWHAAZE00000001	exon	105539795	105539922	-
GWHAAZE00000001	exon	105543600	105543686	-
GWHAAZE00000001	exon	105543880	105543940	-
GWHAAZE00000001	exon	105545195	105545289	-
GWHAAZE00000001	CDS	105545195	105545289	-
GWHAAZE00000001	CDS	105543880	105543940	-
GWHAAZE00000001	CDS	105543600	105543686	-
GWHAAZE00000001	CDS	105539795	105539922	-
GWHAAZE00000001	CDS	105539606	105539666	-
GWHAAZE00000001	CDS	105539397	105539450	-
GWHAAZE00000001	CDS	105539212	105539289	-
GWHAAZE00000001	CDS	105538545	105538650	-
GWHAAZE00000001	CDS	105538268	105538389	-
GWHAAZE00000001	CDS	105537699	105537839	-

Transcript Sequence
>GWHTAAZE003846 ATGTTGCAACAGTTTGTTTGGATGGGAGTCCACCAGCATACCAATTTGATAAGGGTGTTGGAGAAGGAGCCAACAATTGGTTACTTCACATACAGGGTTCTCGTTCGATATTGTGACGGGGCATCGTTTACCGGAGATGTAAAAAAAGTTGATCCTGTTTCGAAACTATACTTTAGGGGCGCTAGAATCTTTGATGCTATTCTGGAGGATCTTTTAACGAAAGGATTGAAGAATGCATCAAACGCTCTTCTTTCCGGTTGTTCAGCTGGTGGGTTATCTTCAATAATGCACTGTGAGAAATTCCGAGCTCTCATACCTACGAGTGCTACTAGAGTAAAATGTCTTTCGGATGGCGGTTATTTTCTCCACACAAAAGATGCTTCCGGAAGATATCAATTTGAAGAAAGATTTCGGAGCATTGTTAACTTACATGGATCAGCTAAGACTTTACCTTTGTCTTGCACATCGAAGATGGATCCTGCTTTATGCTTTTATCCACAATACGTGGCACCGGAAATTCGGACTCCTCTGTTTTTAGTCAATTCCGCCTATGATTTATACCAGGTATCTATGATTTTAGCAGCTGGTCTAACTAATCCTGGTGGACCTTGGGTTGAATGTCAATTTGATATACAAAACTGCACAGCTAGTCAAATTAAAACCTTGCTAGTGTTGGCTGGATTGCCTAACCATTTATCTAGAGGAATGTTTATAAACACTTGTCATACTCACTGTCAAACCCAATATCAGCCCAAATGGTCCGGAGATCCTACAGCAACATTGCATGGAACCTCGGTTAGTGACGCAGTTGGTGATTGGTTCTATGACCGAAGTCGATTCCAAGAGATCGATGAAGAACATGGGTTGCCACGATGGTGTGTAATTGATCCAATAGAGCCAAACCCAACGAACAATTACACATGGCCCGCTAAT

Network for GWHGAAZE003840

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03283.14	PAE	32	279	3.00E-88

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K19882	NOTUM	Wnt signaling pathway	map04310

Gene Ontology

GO term	Ontology	Name
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.694
	SRR3591706	second leaf	0.164
	SRR3591707	mature leaf	0.617
	SRR3591708	Shoot apex	0.207
	SRR3591709	Stem	0.538
	SRR3591710	White floral bud	0.152
	SRR3591711	White flower	0.671
	SRR3591712	Green floral bud	1.020
	SRR3591713	Yellow flower	0.559
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.177
	SRR8316897	Juvenile bud stage	0.070
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.089
	SRR8316901	Third green stage	0.278
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.045
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.162
	SRR6706287	Light intensity 50%	0.027
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.133
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.193
	CNS0095595	Whole white alabastrum(diploid) 2	0.127
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.480
	CNS0095599	Silvery flower (diploied) 2	0.451
	CNS0095600	Silvery flower (diploied) 3	0.165
	CNS0095601	Golden flower (diploid) 1	0.390
	CNS0095602	Golden flower (diploid) 2	0.003
	CNS0095603	Golden flower (diploid) 3	0.248
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.096
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.099
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.108
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.076
	CNS0095610	Silvery flower (tetraploid) 1	1.696
	CNS0095611	Silvery flower (tetraploid) 2	0.046
	CNS0095612	Silvery flower (tetraploid) 3	0.049
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.047
	CRR073299	Stem 3	0.113
	CRR073300	Leaf 1	0.133
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.249
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.012
	CRR073315	Gold flowering 1	0.852
	CRR073316	Gold flowering 2	0.332
	CRR073317	Gold flowering 3	0.412
	CRR073318	Tawny withering 1	5.083
	CRR073319	Tawny withering 2	2.983
	CRR073320	Tawny withering 3	4.695