Detail information of GWHGAAZE003882


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009630238.10PREDICTED: uncharacterized protein LOC104120208 [Nicotiana tomentosiformis]
trEMBLtr|A0A061EWS6|A0A061EWS6_THECC0Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase isoform 1 {ECO:0000313|EMBL:EOY08882.1}
TAIR10AT2G40980.10Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene106445820106448714-
GWHAAZE00000001mRNA106445820106448714-
GWHAAZE00000001exon106445820106447924-
GWHAAZE00000001exon106448693106448714-
GWHAAZE00000001CDS106448693106448714-
GWHAAZE00000001CDS106445820106447924-
Transcript Sequence

Network for GWHGAAZE003882

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0177


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.211
SRR3591706second leaf12.446
SRR3591707mature leaf15.124
SRR3591708Shoot apex23.479
SRR3591709Stem21.994
SRR3591710White floral bud20.485
SRR3591711White flower21.799
SRR3591712Green floral bud24.462
SRR3591713Yellow flower14.636
SRP173429 SRR8316895Juvenile bud stage 13.418
SRR8316896Juvenile bud stage 18.079
SRR8316897Juvenile bud stage 9.036
SRR8316894Third green stage 7.245
SRR8316900Third green stage 19.669
SRR8316901Third green stage 20.544
SRR8316898Complete white stage 10.610
SRR8316899Complete white stage 35.192
SRR8316903Complete white stage 15.135
SRR8316902Silver flowering stage7.771
SRR8316904Silver flowering stage14.005
SRR8316905Silver flowering stage5.248
SRR8316906Gold flowering stage 17.110
SRR8316907Gold flowering stage 14.279
SRR8316908Gold flowering stage 20.490
SRP132670SRR6706286Control18.022
SRR6706287Light intensity 50%18.425
SRR6706288Light intensity 20%20.358
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.379
CNS0095593Slightly white alabastrum(diploid) 212.645
CNS0095594Slightly white alabastrum(diploid) 312.292
CNS0095595Whole white alabastrum(diploid) 211.784
CNS0095596Whole white alabastrum(diploid) 39.403
CNS0095597Whole white alabastrum(diploid) 49.677
CNS0095598Silvery flower (diploied) 118.814
CNS0095599Silvery flower (diploied) 214.102
CNS0095600Silvery flower (diploied) 326.821
CNS0095601Golden flower (diploid) 114.889
CNS0095602Golden flower (diploid) 227.852
CNS0095603Golden flower (diploid) 326.233
CNS0095604Slightly white alabastrum(tetraploid) 112.794
CNS0095605Slightly white alabastrum(tetraploid) 210.856
CNS0095606Slightly white alabastrum(tetraploid) 330.606
CNS0095607Whole white alabastrum(tetraploid) 17.849
CNS0095608Whole white alabastrum(tetraploid) 27.941
CNS0095609Whole white alabastrum(tetraploid) 318.898
CNS0095610Silvery flower (tetraploid) 122.250
CNS0095611Silvery flower (tetraploid) 224.518
CNS0095612Silvery flower (tetraploid) 319.002
CNS0095613Golden flower (tetraploid) 110.211
CNS0095614Golden flower (tetraploid) 219.607
CNS0095615Golden flower (tetraploid) 317.685
CRA001975CRR073297Stem 122.709
CRR073298Stem 219.388
CRR073299Stem 322.368
CRR073300Leaf 122.772
CRR073301Leaf 219.993
CRR073302Leaf 323.580
CRR073303Juvenile bud 124.256
CRR073304Juvenile bud 221.550
CRR073305Juvenile bud 333.551
CRR073306Third green 111.236
CRR073307Third green 211.559
CRR073308Third green 311.216
CRR073309Second white 112.964
CRR073310Second white 213.429
CRR073311Second white 313.920
CRR073312Silver flowering 111.194
CRR073313Silver flowering 213.576
CRR073314Silver flowering 39.940
CRR073315Gold flowering 114.996
CRR073316Gold flowering 219.441
CRR073317Gold flowering 318.462
CRR073318Tawny withering 127.505
CRR073319Tawny withering 222.603
CRR073320Tawny withering 326.104