Detail information of GWHGAAZE003893


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009784961.13.11808E-08PREDICTED: myb-like protein X [Nicotiana sylvestris]
trEMBLtr|A0A067EM53|A0A067EM53_CITSI0.0000008Uncharacterized protein {ECO:0000313|EMBL:KDO54990.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene106610079106611320-
GWHAAZE00000001mRNA106610079106611320-
GWHAAZE00000001exon106610079106611320-
GWHAAZE00000001CDS106610079106611320-
Transcript Sequence

Network for GWHGAAZE003893

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0184


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf304.092
SRR3591706second leaf42.339
SRR3591707mature leaf13.330
SRR3591708Shoot apex94.127
SRR3591709Stem178.465
SRR3591710White floral bud58.546
SRR3591711White flower98.153
SRR3591712Green floral bud38.517
SRR3591713Yellow flower95.550
SRP173429 SRR8316895Juvenile bud stage 135.839
SRR8316896Juvenile bud stage 168.048
SRR8316897Juvenile bud stage 167.164
SRR8316894Third green stage 22.119
SRR8316900Third green stage 33.559
SRR8316901Third green stage 87.290
SRR8316898Complete white stage 12.206
SRR8316899Complete white stage 79.657
SRR8316903Complete white stage 53.604
SRR8316902Silver flowering stage37.392
SRR8316904Silver flowering stage59.107
SRR8316905Silver flowering stage51.412
SRR8316906Gold flowering stage 128.332
SRR8316907Gold flowering stage 124.075
SRR8316908Gold flowering stage 104.179
SRP132670SRR6706286Control52.084
SRR6706287Light intensity 50%34.331
SRR6706288Light intensity 20%32.786
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1323.823
CNS0095593Slightly white alabastrum(diploid) 2488.388
CNS0095594Slightly white alabastrum(diploid) 3838.465
CNS0095595Whole white alabastrum(diploid) 2351.739
CNS0095596Whole white alabastrum(diploid) 330.842
CNS0095597Whole white alabastrum(diploid) 4180.766
CNS0095598Silvery flower (diploied) 1361.159
CNS0095599Silvery flower (diploied) 2369.566
CNS0095600Silvery flower (diploied) 379.410
CNS0095601Golden flower (diploid) 1369.350
CNS0095602Golden flower (diploid) 2118.555
CNS0095603Golden flower (diploid) 3120.614
CNS0095604Slightly white alabastrum(tetraploid) 118.469
CNS0095605Slightly white alabastrum(tetraploid) 221.156
CNS0095606Slightly white alabastrum(tetraploid) 321.948
CNS0095607Whole white alabastrum(tetraploid) 113.465
CNS0095608Whole white alabastrum(tetraploid) 216.702
CNS0095609Whole white alabastrum(tetraploid) 314.725
CNS0095610Silvery flower (tetraploid) 147.513
CNS0095611Silvery flower (tetraploid) 221.782
CNS0095612Silvery flower (tetraploid) 312.952
CNS0095613Golden flower (tetraploid) 159.575
CNS0095614Golden flower (tetraploid) 248.536
CNS0095615Golden flower (tetraploid) 320.468
CRA001975CRR073297Stem 152.358
CRR073298Stem 261.652
CRR073299Stem 318.307
CRR073300Leaf 176.811
CRR073301Leaf 290.156
CRR073302Leaf 312.863
CRR073303Juvenile bud 128.464
CRR073304Juvenile bud 215.425
CRR073305Juvenile bud 317.892
CRR073306Third green 18.896
CRR073307Third green 27.672
CRR073308Third green 37.804
CRR073309Second white 11.841
CRR073310Second white 26.644
CRR073311Second white 35.704
CRR073312Silver flowering 16.676
CRR073313Silver flowering 23.354
CRR073314Silver flowering 312.558
CRR073315Gold flowering 11.438
CRR073316Gold flowering 23.686
CRR073317Gold flowering 33.626
CRR073318Tawny withering 146.369
CRR073319Tawny withering 2103.323
CRR073320Tawny withering 327.942