Detail information of GWHGAAZE003910


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009771295.13.5741E-169PREDICTED: NADH--cytochrome b5 reductase 1-like [Nicotiana sylvestris]
COGYP_004053693.13E-24oxidoreductase fad/nad(p)-binding domain protein
Swissprottr|Q9ZNT1|NB5R1_ARATH9E-166NADH--cytochrome b5 reductase 1
trEMBLtr|M5VXT1|M5VXT1_PRUPE8E-168NADH-cytochrome b5 reductase {ECO:0000256|RuleBase:RU361226}
TAIR10AT5G17770.13E-131NADH:cytochrome B5 reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene106896903106902600-
GWHAAZE00000001mRNA106896903106902600-
GWHAAZE00000001exon106902588106902600-
GWHAAZE00000001exon106900985106901126-
GWHAAZE00000001exon106900758106900848-
GWHAAZE00000001exon106900294106900371-
GWHAAZE00000001exon106899057106899137-
GWHAAZE00000001exon106898849106898938-
GWHAAZE00000001exon106898185106898250-
GWHAAZE00000001exon106897421106897507-
GWHAAZE00000001exon106896903106896995-
GWHAAZE00000001CDS106902588106902600-
GWHAAZE00000001CDS106900985106901126-
GWHAAZE00000001CDS106900758106900848-
GWHAAZE00000001CDS106900294106900371-
GWHAAZE00000001CDS106899057106899137-
GWHAAZE00000001CDS106898849106898938-
GWHAAZE00000001CDS106898185106898250-
GWHAAZE00000001CDS106897421106897507-
GWHAAZE00000001CDS106896903106896995-
Transcript Sequence

Network for GWHGAAZE003910

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00970.25FAD_binding_6151131.30E-33
PF00175.22NAD_binding_11232294.60E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00326E1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf167.038
SRR3591706second leaf180.836
SRR3591707mature leaf68.660
SRR3591708Shoot apex211.750
SRR3591709Stem329.326
SRR3591710White floral bud132.394
SRR3591711White flower107.063
SRR3591712Green floral bud183.514
SRR3591713Yellow flower75.184
SRP173429 SRR8316895Juvenile bud stage 140.728
SRR8316896Juvenile bud stage 143.905
SRR8316897Juvenile bud stage 74.135
SRR8316894Third green stage 60.639
SRR8316900Third green stage 178.322
SRR8316901Third green stage 200.398
SRR8316898Complete white stage 64.822
SRR8316899Complete white stage 191.002
SRR8316903Complete white stage 84.160
SRR8316902Silver flowering stage30.597
SRR8316904Silver flowering stage43.824
SRR8316905Silver flowering stage14.270
SRR8316906Gold flowering stage 67.446
SRR8316907Gold flowering stage 66.795
SRR8316908Gold flowering stage 119.292
SRP132670SRR6706286Control225.399
SRR6706287Light intensity 50%218.181
SRR6706288Light intensity 20%242.928
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1189.159
CNS0095593Slightly white alabastrum(diploid) 2189.303
CNS0095594Slightly white alabastrum(diploid) 3176.224
CNS0095595Whole white alabastrum(diploid) 2171.230
CNS0095596Whole white alabastrum(diploid) 3149.734
CNS0095597Whole white alabastrum(diploid) 4150.869
CNS0095598Silvery flower (diploied) 1110.530
CNS0095599Silvery flower (diploied) 297.062
CNS0095600Silvery flower (diploied) 389.097
CNS0095601Golden flower (diploid) 188.292
CNS0095602Golden flower (diploid) 288.401
CNS0095603Golden flower (diploid) 384.779
CNS0095604Slightly white alabastrum(tetraploid) 1169.420
CNS0095605Slightly white alabastrum(tetraploid) 2172.567
CNS0095606Slightly white alabastrum(tetraploid) 3288.131
CNS0095607Whole white alabastrum(tetraploid) 1112.407
CNS0095608Whole white alabastrum(tetraploid) 293.630
CNS0095609Whole white alabastrum(tetraploid) 3146.069
CNS0095610Silvery flower (tetraploid) 198.181
CNS0095611Silvery flower (tetraploid) 285.571
CNS0095612Silvery flower (tetraploid) 363.213
CNS0095613Golden flower (tetraploid) 183.010
CNS0095614Golden flower (tetraploid) 298.671
CNS0095615Golden flower (tetraploid) 354.243
CRA001975CRR073297Stem 1236.049
CRR073298Stem 2218.965
CRR073299Stem 3290.368
CRR073300Leaf 1253.758
CRR073301Leaf 2236.087
CRR073302Leaf 3306.918
CRR073303Juvenile bud 1258.423
CRR073304Juvenile bud 2436.521
CRR073305Juvenile bud 3282.825
CRR073306Third green 166.056
CRR073307Third green 270.388
CRR073308Third green 367.875
CRR073309Second white 152.440
CRR073310Second white 234.173
CRR073311Second white 333.538
CRR073312Silver flowering 172.860
CRR073313Silver flowering 2103.973
CRR073314Silver flowering 390.800
CRR073315Gold flowering 192.858
CRR073316Gold flowering 288.431
CRR073317Gold flowering 3118.243
CRR073318Tawny withering 1272.891
CRR073319Tawny withering 2235.246
CRR073320Tawny withering 3298.064