Detail information of GWHGAAZE003975


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFQ37421.10p-coumaroyl quinate/shikimate 3'-hydroxylase [Lonicera japonica]
COGNP_354568.14E-28cytochrome P450
Swissprottr|O48922|C98A2_SOYBN0Cytochrome P450 98A2
trEMBLtr|J7IE14|J7IE14_LONJA0p-coumaroyl quinate/shikimate 3'-hydroxylase {ECO:0000313|EMBL:AFQ37421.1}
TAIR10AT2G40890.10cytochrome P450, family 98, subfamily A, polypeptide 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene108263948108269112-
GWHAAZE00000001mRNA108263948108269112-
GWHAAZE00000001exon108268657108269112-
GWHAAZE00000001exon108265993108266517-
GWHAAZE00000001exon108263948108264592-
GWHAAZE00000001CDS108268657108269112-
GWHAAZE00000001CDS108265993108266517-
GWHAAZE00000001CDS108263948108264592-
Transcript Sequence

Network for GWHGAAZE003975

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p450301571.80E-15
PF00067.23p4501895093.80E-79
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09754CYP98A, C3'H Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf100.668
SRR3591706second leaf175.622
SRR3591707mature leaf222.835
SRR3591708Shoot apex142.701
SRR3591709Stem249.807
SRR3591710White floral bud199.417
SRR3591711White flower287.058
SRR3591712Green floral bud87.754
SRR3591713Yellow flower202.970
SRP173429 SRR8316895Juvenile bud stage 163.465
SRR8316896Juvenile bud stage 156.312
SRR8316897Juvenile bud stage 75.196
SRR8316894Third green stage 45.160
SRR8316900Third green stage 111.296
SRR8316901Third green stage 139.169
SRR8316898Complete white stage 67.922
SRR8316899Complete white stage 119.455
SRR8316903Complete white stage 113.355
SRR8316902Silver flowering stage79.825
SRR8316904Silver flowering stage87.862
SRR8316905Silver flowering stage45.121
SRR8316906Gold flowering stage 156.675
SRR8316907Gold flowering stage 181.730
SRR8316908Gold flowering stage 240.785
SRP132670SRR6706286Control138.641
SRR6706287Light intensity 50%177.141
SRR6706288Light intensity 20%168.546
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1130.369
CNS0095593Slightly white alabastrum(diploid) 2131.698
CNS0095594Slightly white alabastrum(diploid) 3137.769
CNS0095595Whole white alabastrum(diploid) 2114.457
CNS0095596Whole white alabastrum(diploid) 346.506
CNS0095597Whole white alabastrum(diploid) 488.061
CNS0095598Silvery flower (diploied) 1180.108
CNS0095599Silvery flower (diploied) 2221.372
CNS0095600Silvery flower (diploied) 3114.298
CNS0095601Golden flower (diploid) 1174.571
CNS0095602Golden flower (diploid) 2163.763
CNS0095603Golden flower (diploid) 3165.543
CNS0095604Slightly white alabastrum(tetraploid) 1117.827
CNS0095605Slightly white alabastrum(tetraploid) 286.492
CNS0095606Slightly white alabastrum(tetraploid) 3299.060
CNS0095607Whole white alabastrum(tetraploid) 172.228
CNS0095608Whole white alabastrum(tetraploid) 225.166
CNS0095609Whole white alabastrum(tetraploid) 3154.636
CNS0095610Silvery flower (tetraploid) 1135.409
CNS0095611Silvery flower (tetraploid) 279.568
CNS0095612Silvery flower (tetraploid) 3116.026
CNS0095613Golden flower (tetraploid) 1101.400
CNS0095614Golden flower (tetraploid) 2155.827
CNS0095615Golden flower (tetraploid) 377.370
CRA001975CRR073297Stem 1155.826
CRR073298Stem 2144.363
CRR073299Stem 3201.759
CRR073300Leaf 1124.314
CRR073301Leaf 2138.863
CRR073302Leaf 3152.637
CRR073303Juvenile bud 1103.632
CRR073304Juvenile bud 2198.585
CRR073305Juvenile bud 3121.677
CRR073306Third green 1544.774
CRR073307Third green 2381.558
CRR073308Third green 3423.926
CRR073309Second white 1473.958
CRR073310Second white 2331.115
CRR073311Second white 3328.161
CRR073312Silver flowering 1359.767
CRR073313Silver flowering 2508.768
CRR073314Silver flowering 3426.872
CRR073315Gold flowering 164.725
CRR073316Gold flowering 296.445
CRR073317Gold flowering 387.233
CRR073318Tawny withering 1187.238
CRR073319Tawny withering 2213.696
CRR073320Tawny withering 3174.859