Detail information of GWHGAAZE004011


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP09551.10unnamed protein product [Coffea canephora]
COGYP_004253406.13E-37TIR protein
Swissprottr|Q9M1K2|PI5K4_ARATH0Phosphatidylinositol 4-phosphate 5-kinase 4
trEMBLtr|A0A068UM60|A0A068UM60_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_39 {ECO:0000313|EMBL:CDP09551.1}
TAIR10AT3G56960.10phosphatidyl inositol monophosphate 5 kinase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene109306565109310836-
GWHAAZE00000001mRNA109306565109310836-
GWHAAZE00000001exon109306565109306853-
GWHAAZE00000001exon109307357109307426-
GWHAAZE00000001exon109307671109307801-
GWHAAZE00000001exon109308181109308374-
GWHAAZE00000001exon109308473109308589-
GWHAAZE00000001exon109308706109308871-
GWHAAZE00000001exon109309050109309217-
GWHAAZE00000001exon109309656109310836-
GWHAAZE00000001CDS109309656109310836-
GWHAAZE00000001CDS109309050109309217-
GWHAAZE00000001CDS109308706109308871-
GWHAAZE00000001CDS109308473109308589-
GWHAAZE00000001CDS109308181109308374-
GWHAAZE00000001CDS109307671109307801-
GWHAAZE00000001CDS109307357109307426-
GWHAAZE00000001CDS109306565109306853-
Transcript Sequence

Network for GWHGAAZE004011

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02493.21MORN67898.90E-06
PF02493.21MORN901114.80E-05
PF02493.21MORN1131350.00017
PF02493.21MORN1361589.60E-06
PF02493.21MORN1591800.0028
PF02493.21MORN1822035.10E-06
PF02493.21MORN2052260.00011
PF01504.19PIP5K4707653.30E-92
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00889PIP5K Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0046488biological_processphosphatidylinositol metabolic process
GO:0005524molecular_functionATP binding
GO:0016308molecular_function1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016307molecular_functionphosphatidylinositol phosphate kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.081
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.061
SRR3591709Stem0.061
SRR3591710White floral bud19.663
SRR3591711White flower1.328
SRR3591712Green floral bud17.137
SRR3591713Yellow flower0.755
SRP173429 SRR8316895Juvenile bud stage 0.476
SRR8316896Juvenile bud stage 2.197
SRR8316897Juvenile bud stage 1.746
SRR8316894Third green stage 1.766
SRR8316900Third green stage 9.801
SRR8316901Third green stage 9.403
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.160
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.159
SRR8316904Silver flowering stage0.792
SRR8316905Silver flowering stage0.240
SRR8316906Gold flowering stage 0.141
SRR8316907Gold flowering stage 0.110
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control6.955
SRR6706287Light intensity 50%7.809
SRR6706288Light intensity 20%6.374
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.205
CNS0095593Slightly white alabastrum(diploid) 24.637
CNS0095594Slightly white alabastrum(diploid) 34.670
CNS0095595Whole white alabastrum(diploid) 212.530
CNS0095596Whole white alabastrum(diploid) 312.116
CNS0095597Whole white alabastrum(diploid) 414.940
CNS0095598Silvery flower (diploied) 10.874
CNS0095599Silvery flower (diploied) 22.523
CNS0095600Silvery flower (diploied) 30.643
CNS0095601Golden flower (diploid) 10.585
CNS0095602Golden flower (diploid) 20.904
CNS0095603Golden flower (diploid) 30.858
CNS0095604Slightly white alabastrum(tetraploid) 114.155
CNS0095605Slightly white alabastrum(tetraploid) 215.294
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 131.304
CNS0095608Whole white alabastrum(tetraploid) 240.783
CNS0095609Whole white alabastrum(tetraploid) 322.018
CNS0095610Silvery flower (tetraploid) 10.862
CNS0095611Silvery flower (tetraploid) 23.155
CNS0095612Silvery flower (tetraploid) 37.820
CNS0095613Golden flower (tetraploid) 10.831
CNS0095614Golden flower (tetraploid) 20.255
CNS0095615Golden flower (tetraploid) 33.426
CRA001975CRR073297Stem 11.142
CRR073298Stem 21.641
CRR073299Stem 30.511
CRR073300Leaf 17.799
CRR073301Leaf 25.289
CRR073302Leaf 32.179
CRR073303Juvenile bud 17.137
CRR073304Juvenile bud 26.420
CRR073305Juvenile bud 30.760
CRR073306Third green 15.874
CRR073307Third green 25.952
CRR073308Third green 34.560
CRR073309Second white 10.439
CRR073310Second white 20.624
CRR073311Second white 31.101
CRR073312Silver flowering 14.671
CRR073313Silver flowering 24.110
CRR073314Silver flowering 32.194
CRR073315Gold flowering 14.318
CRR073316Gold flowering 21.106
CRR073317Gold flowering 31.941
CRR073318Tawny withering 14.098
CRR073319Tawny withering 24.011
CRR073320Tawny withering 33.400