Detail information of GWHGAAZE004027


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003634222.11.63845E-32PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Vitis vinifera]
Swissprottr|Q94CD1|HHT1_ARATH8E-29Omega-hydroxypalmitate O-feruloyl transferase
trEMBLtr|F6GSZ7|F6GSZ7_VITVI2E-33Putative uncharacterized protein {ECO:0000313|EMBL:CCB43342.1}
TAIR10AT5G41040.12E-25HXXXD-type acyl-transferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene109659270109659875+
GWHAAZE00000001mRNA109659270109659875+
GWHAAZE00000001exon109659270109659875+
GWHAAZE00000001CDS109659270109659875+
Transcript Sequence

Network for GWHGAAZE004027

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02458.16Transferase281343.10E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15400HHT1 Cutin, suberine and wax biosynthesis map00073

Gene Ontology

GO term OntologyName
GO:0016747molecular_functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.932
SRR3591706second leaf1.585
SRR3591707mature leaf1.092
SRR3591708Shoot apex2.794
SRR3591709Stem6.676
SRR3591710White floral bud2.258
SRR3591711White flower2.029
SRR3591712Green floral bud2.370
SRR3591713Yellow flower2.177
SRP173429 SRR8316895Juvenile bud stage 2.444
SRR8316896Juvenile bud stage 3.406
SRR8316897Juvenile bud stage 1.431
SRR8316894Third green stage 1.834
SRR8316900Third green stage 3.206
SRR8316901Third green stage 3.114
SRR8316898Complete white stage 1.131
SRR8316899Complete white stage 3.290
SRR8316903Complete white stage 1.772
SRR8316902Silver flowering stage0.756
SRR8316904Silver flowering stage1.190
SRR8316905Silver flowering stage0.569
SRR8316906Gold flowering stage 2.412
SRR8316907Gold flowering stage 1.301
SRR8316908Gold flowering stage 1.222
SRP132670SRR6706286Control1.530
SRR6706287Light intensity 50%1.477
SRR6706288Light intensity 20%1.747
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.478
CNS0095593Slightly white alabastrum(diploid) 24.824
CNS0095594Slightly white alabastrum(diploid) 35.116
CNS0095595Whole white alabastrum(diploid) 23.413
CNS0095596Whole white alabastrum(diploid) 34.837
CNS0095597Whole white alabastrum(diploid) 45.353
CNS0095598Silvery flower (diploied) 14.526
CNS0095599Silvery flower (diploied) 23.802
CNS0095600Silvery flower (diploied) 31.488
CNS0095601Golden flower (diploid) 13.272
CNS0095602Golden flower (diploid) 22.769
CNS0095603Golden flower (diploid) 31.341
CNS0095604Slightly white alabastrum(tetraploid) 13.828
CNS0095605Slightly white alabastrum(tetraploid) 24.147
CNS0095606Slightly white alabastrum(tetraploid) 33.304
CNS0095607Whole white alabastrum(tetraploid) 12.877
CNS0095608Whole white alabastrum(tetraploid) 23.172
CNS0095609Whole white alabastrum(tetraploid) 31.436
CNS0095610Silvery flower (tetraploid) 11.803
CNS0095611Silvery flower (tetraploid) 22.489
CNS0095612Silvery flower (tetraploid) 30.889
CNS0095613Golden flower (tetraploid) 11.182
CNS0095614Golden flower (tetraploid) 21.117
CNS0095615Golden flower (tetraploid) 32.101
CRA001975CRR073297Stem 11.723
CRR073298Stem 21.556
CRR073299Stem 31.198
CRR073300Leaf 11.173
CRR073301Leaf 23.050
CRR073302Leaf 30.463
CRR073303Juvenile bud 10.826
CRR073304Juvenile bud 20.246
CRR073305Juvenile bud 31.167
CRR073306Third green 10.193
CRR073307Third green 20.623
CRR073308Third green 30.032
CRR073309Second white 10.213
CRR073310Second white 20.000
CRR073311Second white 30.256
CRR073312Silver flowering 10.418
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.655
CRR073316Gold flowering 20.319
CRR073317Gold flowering 30.033
CRR073318Tawny withering 11.117
CRR073319Tawny withering 21.292
CRR073320Tawny withering 31.212