Detail information of GWHGAAZE004168


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002284489.10PREDICTED: S-formylglutathione hydrolase isoform X2 [Vitis vinifera]
COGYP_002354276.12E-113S-formylglutathione hydrolase
Swissprottr|Q8LAS8|SFGH_ARATH3E-175S-formylglutathione hydrolase
trEMBLtr|D7THS4|D7THS4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI29800.3}
TAIR10AT2G41530.11E-135S-formylglutathione hydrolase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene112553769112559883-
GWHAAZE00000001mRNA112553769112559883-
GWHAAZE00000001exon112553769112553951-
GWHAAZE00000001exon112555443112555508-
GWHAAZE00000001exon112555598112555696-
GWHAAZE00000001exon112556247112556443-
GWHAAZE00000001exon112557842112557889-
GWHAAZE00000001exon112558483112558600-
GWHAAZE00000001exon112559731112559883-
GWHAAZE00000001CDS112559731112559883-
GWHAAZE00000001CDS112558483112558600-
GWHAAZE00000001CDS112557842112557889-
GWHAAZE00000001CDS112556247112556443-
GWHAAZE00000001CDS112555598112555696-
GWHAAZE00000001CDS112555443112555508-
GWHAAZE00000001CDS112553769112553951-
Transcript Sequence

Network for GWHGAAZE004168

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00756.21Esterase252793.30E-59
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01070frmB, ESD, fghA Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Methane metabolismmap00680

Gene Ontology

GO term OntologyName
GO:0046294biological_processformaldehyde catabolic process
GO:0018738molecular_functionS-formylglutathione hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf117.351
SRR3591706second leaf70.306
SRR3591707mature leaf77.890
SRR3591708Shoot apex102.304
SRR3591709Stem86.607
SRR3591710White floral bud112.816
SRR3591711White flower134.740
SRR3591712Green floral bud151.157
SRR3591713Yellow flower136.669
SRP173429 SRR8316895Juvenile bud stage 106.495
SRR8316896Juvenile bud stage 159.297
SRR8316897Juvenile bud stage 72.271
SRR8316894Third green stage 61.899
SRR8316900Third green stage 211.036
SRR8316901Third green stage 200.771
SRR8316898Complete white stage 94.273
SRR8316899Complete white stage 289.183
SRR8316903Complete white stage 124.660
SRR8316902Silver flowering stage65.475
SRR8316904Silver flowering stage76.782
SRR8316905Silver flowering stage43.269
SRR8316906Gold flowering stage 117.143
SRR8316907Gold flowering stage 134.382
SRR8316908Gold flowering stage 132.330
SRP132670SRR6706286Control172.184
SRR6706287Light intensity 50%165.824
SRR6706288Light intensity 20%189.333
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1138.812
CNS0095593Slightly white alabastrum(diploid) 2152.861
CNS0095594Slightly white alabastrum(diploid) 3137.133
CNS0095595Whole white alabastrum(diploid) 2131.397
CNS0095596Whole white alabastrum(diploid) 3139.376
CNS0095597Whole white alabastrum(diploid) 4121.375
CNS0095598Silvery flower (diploied) 1135.409
CNS0095599Silvery flower (diploied) 2143.554
CNS0095600Silvery flower (diploied) 3217.694
CNS0095601Golden flower (diploid) 1117.834
CNS0095602Golden flower (diploid) 2179.471
CNS0095603Golden flower (diploid) 3172.790
CNS0095604Slightly white alabastrum(tetraploid) 1156.835
CNS0095605Slightly white alabastrum(tetraploid) 2141.258
CNS0095606Slightly white alabastrum(tetraploid) 3215.095
CNS0095607Whole white alabastrum(tetraploid) 1103.444
CNS0095608Whole white alabastrum(tetraploid) 296.048
CNS0095609Whole white alabastrum(tetraploid) 3186.161
CNS0095610Silvery flower (tetraploid) 1237.939
CNS0095611Silvery flower (tetraploid) 2258.318
CNS0095612Silvery flower (tetraploid) 3226.819
CNS0095613Golden flower (tetraploid) 1156.165
CNS0095614Golden flower (tetraploid) 2217.726
CNS0095615Golden flower (tetraploid) 3107.873
CRA001975CRR073297Stem 1122.959
CRR073298Stem 2119.391
CRR073299Stem 3150.847
CRR073300Leaf 1141.023
CRR073301Leaf 2135.280
CRR073302Leaf 3174.522
CRR073303Juvenile bud 1158.200
CRR073304Juvenile bud 2168.548
CRR073305Juvenile bud 3181.244
CRR073306Third green 171.325
CRR073307Third green 282.141
CRR073308Third green 368.178
CRR073309Second white 1121.040
CRR073310Second white 271.016
CRR073311Second white 353.592
CRR073312Silver flowering 149.610
CRR073313Silver flowering 267.264
CRR073314Silver flowering 345.565
CRR073315Gold flowering 181.310
CRR073316Gold flowering 282.826
CRR073317Gold flowering 389.027
CRR073318Tawny withering 185.779
CRR073319Tawny withering 274.146
CRR073320Tawny withering 375.142