Detail information of GWHGAAZE004230


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011075041.10PREDICTED: uncharacterized protein LOC105159627 [Sesamum indicum]
COGYP_005321927.15E-14peptidase c14 caspase catalytic subunit p20
Swissprottr|P42158|KC1D_ARATH8E-56Casein kinase I isoform delta-like
trEMBLtr|A0A068V1E4|A0A068V1E4_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_81 {ECO:0000313|EMBL:CDP14324.1}
TAIR10AT3G03940.10Protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene113674275113681729-
GWHAAZE00000001mRNA113674275113681729-
GWHAAZE00000001exon113681541113681729-
GWHAAZE00000001exon113680487113680941-
GWHAAZE00000001exon113680132113680257-
GWHAAZE00000001exon113679979113680052-
GWHAAZE00000001exon113679796113679865-
GWHAAZE00000001exon113679630113679685-
GWHAAZE00000001exon113679322113679393-
GWHAAZE00000001exon113679127113679221-
GWHAAZE00000001exon113678431113678497-
GWHAAZE00000001exon113678227113678356-
GWHAAZE00000001exon113677918113678136-
GWHAAZE00000001exon113677467113677597-
GWHAAZE00000001exon113676738113676912-
GWHAAZE00000001exon113676557113676647-
GWHAAZE00000001exon113675694113675851-
GWHAAZE00000001exon113674945113675133-
GWHAAZE00000001exon113674275113674365-
GWHAAZE00000001five_prime_UTR113681541113681729-
GWHAAZE00000001five_prime_UTR113680898113680941-
GWHAAZE00000001CDS113680487113680897-
GWHAAZE00000001CDS113680132113680257-
GWHAAZE00000001CDS113679979113680052-
GWHAAZE00000001CDS113679796113679865-
GWHAAZE00000001CDS113679630113679685-
GWHAAZE00000001CDS113679322113679393-
GWHAAZE00000001CDS113679127113679221-
GWHAAZE00000001CDS113678431113678497-
GWHAAZE00000001CDS113678227113678356-
GWHAAZE00000001CDS113677918113678136-
GWHAAZE00000001CDS113677467113677597-
GWHAAZE00000001CDS113676738113676912-
GWHAAZE00000001CDS113676557113676647-
GWHAAZE00000001CDS113675694113675851-
GWHAAZE00000001CDS113674945113675133-
GWHAAZE00000001CDS113674306113674365-
GWHAAZE00000001three_prime_UTR113674275113674305-
Transcript Sequence

Network for GWHGAAZE004230

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1463857.30E-16
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1-Pl

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.130
SRR3591706second leaf14.711
SRR3591707mature leaf23.801
SRR3591708Shoot apex20.800
SRR3591709Stem55.320
SRR3591710White floral bud90.141
SRR3591711White flower106.492
SRR3591712Green floral bud49.189
SRR3591713Yellow flower75.687
SRP173429 SRR8316895Juvenile bud stage 22.508
SRR8316896Juvenile bud stage 30.361
SRR8316897Juvenile bud stage 13.547
SRR8316894Third green stage 15.439
SRR8316900Third green stage 40.805
SRR8316901Third green stage 37.801
SRR8316898Complete white stage 38.996
SRR8316899Complete white stage 72.091
SRR8316903Complete white stage 77.666
SRR8316902Silver flowering stage73.215
SRR8316904Silver flowering stage115.451
SRR8316905Silver flowering stage62.668
SRR8316906Gold flowering stage 162.500
SRR8316907Gold flowering stage 152.646
SRR8316908Gold flowering stage 161.100
SRP132670SRR6706286Control51.094
SRR6706287Light intensity 50%49.873
SRR6706288Light intensity 20%52.246
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.388
CNS0095593Slightly white alabastrum(diploid) 221.069
CNS0095594Slightly white alabastrum(diploid) 319.667
CNS0095595Whole white alabastrum(diploid) 224.233
CNS0095596Whole white alabastrum(diploid) 320.907
CNS0095597Whole white alabastrum(diploid) 425.469
CNS0095598Silvery flower (diploied) 154.495
CNS0095599Silvery flower (diploied) 245.639
CNS0095600Silvery flower (diploied) 3122.243
CNS0095601Golden flower (diploid) 147.511
CNS0095602Golden flower (diploid) 2109.033
CNS0095603Golden flower (diploid) 3103.962
CNS0095604Slightly white alabastrum(tetraploid) 129.454
CNS0095605Slightly white alabastrum(tetraploid) 224.191
CNS0095606Slightly white alabastrum(tetraploid) 350.155
CNS0095607Whole white alabastrum(tetraploid) 125.864
CNS0095608Whole white alabastrum(tetraploid) 223.827
CNS0095609Whole white alabastrum(tetraploid) 339.532
CNS0095610Silvery flower (tetraploid) 1127.243
CNS0095611Silvery flower (tetraploid) 2135.593
CNS0095612Silvery flower (tetraploid) 397.801
CNS0095613Golden flower (tetraploid) 186.539
CNS0095614Golden flower (tetraploid) 2124.201
CNS0095615Golden flower (tetraploid) 3109.377
CRA001975CRR073297Stem 145.463
CRR073298Stem 241.601
CRR073299Stem 339.884
CRR073300Leaf 146.342
CRR073301Leaf 240.055
CRR073302Leaf 334.485
CRR073303Juvenile bud 141.687
CRR073304Juvenile bud 232.847
CRR073305Juvenile bud 361.913
CRR073306Third green 146.849
CRR073307Third green 238.533
CRR073308Third green 345.471
CRR073309Second white 133.549
CRR073310Second white 230.893
CRR073311Second white 330.659
CRR073312Silver flowering 126.002
CRR073313Silver flowering 221.985
CRR073314Silver flowering 322.755
CRR073315Gold flowering 123.818
CRR073316Gold flowering 233.387
CRR073317Gold flowering 322.984
CRR073318Tawny withering 141.164
CRR073319Tawny withering 235.163
CRR073320Tawny withering 330.199