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Detail information of GWHGAAZE004285
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002276461.1
0
PREDICTED: protein NAP1 [Vitis vinifera]
Swissprot
tr|Q5S2C4|NCKP1_ARATH
0
Protein NAP1
trEMBL
tr|D7T9L3|D7T9L3_VITVI
0
Putative uncharacterized protein {ECO:0000313|EMBL:CBI27184.3}
TAIR10
AT2G35110.2
0
transcription activators
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
114569762
114592694
+
GWHAAZE00000001
mRNA
114569762
114592694
+
GWHAAZE00000001
exon
114569762
114570187
+
GWHAAZE00000001
exon
114570283
114570357
+
GWHAAZE00000001
exon
114571735
114571815
+
GWHAAZE00000001
exon
114572166
114572248
+
GWHAAZE00000001
exon
114573048
114573132
+
GWHAAZE00000001
exon
114573732
114573857
+
GWHAAZE00000001
exon
114574027
114574134
+
GWHAAZE00000001
exon
114576790
114576834
+
GWHAAZE00000001
exon
114576914
114577056
+
GWHAAZE00000001
exon
114578654
114578818
+
GWHAAZE00000001
exon
114580137
114580281
+
GWHAAZE00000001
exon
114580418
114580496
+
GWHAAZE00000001
exon
114582840
114583033
+
GWHAAZE00000001
exon
114585121
114585266
+
GWHAAZE00000001
exon
114586965
114587046
+
GWHAAZE00000001
exon
114587120
114587230
+
GWHAAZE00000001
exon
114588426
114588551
+
GWHAAZE00000001
exon
114588793
114588932
+
GWHAAZE00000001
exon
114589032
114589128
+
GWHAAZE00000001
exon
114589499
114590487
+
GWHAAZE00000001
exon
114591225
114591437
+
GWHAAZE00000001
exon
114592208
114592694
+
GWHAAZE00000001
CDS
114569762
114570187
+
GWHAAZE00000001
CDS
114570283
114570357
+
GWHAAZE00000001
CDS
114571735
114571815
+
GWHAAZE00000001
CDS
114572166
114572248
+
GWHAAZE00000001
CDS
114573048
114573132
+
GWHAAZE00000001
CDS
114573732
114573857
+
GWHAAZE00000001
CDS
114574027
114574134
+
GWHAAZE00000001
CDS
114576790
114576834
+
GWHAAZE00000001
CDS
114576914
114577056
+
GWHAAZE00000001
CDS
114578654
114578818
+
GWHAAZE00000001
CDS
114580137
114580281
+
GWHAAZE00000001
CDS
114580418
114580496
+
GWHAAZE00000001
CDS
114582840
114583033
+
GWHAAZE00000001
CDS
114585121
114585266
+
GWHAAZE00000001
CDS
114586965
114587046
+
GWHAAZE00000001
CDS
114587120
114587230
+
GWHAAZE00000001
CDS
114588426
114588551
+
GWHAAZE00000001
CDS
114588793
114588932
+
GWHAAZE00000001
CDS
114589032
114589128
+
GWHAAZE00000001
CDS
114589499
114590487
+
GWHAAZE00000001
CDS
114591225
114591437
+
GWHAAZE00000001
CDS
114592208
114592694
+
Transcript Sequence
>GWHTAAZE004291 GGTACTAGGTGCAATAAAATGGCAAAGTCTAGGCAGCATTTTCCAACACAAGACGTGTTGTCCTCATCACCCAGATCGAGGGAATGGGAAGGTCCATCAAGATGGACCGAGTACTTGAGTCAAGAAATGACTCCTCCACTGTCTTCTAGAACCTCTAGAAATGTTGGGTCCGAAGGAACAGCACAAAGTTCTGGAGGGTCTCATAAGGGACTGAACATGCAGTGGGTATATCAGCTTACACAAGTTGCCCAAGGACTAATGGCCAAAATGTATAGATTGAATCAGATTTTGGACTATCCGGATTCAGTGGGTCATGTGTTCTCAGAAGCGTTTTGGAAAGCTGGCGTGTTCCCAAATCATCCAAAACTATGTGTCTTTCTCTCGAAGAAGTTTCCGGAACATCATAGCAGACTACAAGTCGAACGTGTTGATAAGGTTGCTTTGGATTCTTTGAATGATCATGCAGAAGTTCACTTGCAAAGCTTGGAGCCATGGGTTCAGCTGCTTCTTGACCTAATGGCATTTCGAGAACAGGCTTTACGGCTCATATTGGATCTAAGCAGCACTGTAATTACCTTGTTGCTACCAAGGAAAATGATGCTACAATTGTATAACCTGTTGCATGCCATGTTGAGAAATGACCGGGACTGTGACTTTTATCATCGGCTGCTTCAGTTCATAGACTCATACGATCCACCACTGAAAGGATTACATGAAGACTTGAATTTTGTCAGCCCTCGCATAGGAGAGGTTTTGGAGGCTGTTGGTCCTATCATATTTTTATCAACAGATACAAGGAAGCTTAGAAATGAGGGTTTCTTAAGTCCGTTTCATCCTCGATATCCAGATATCCTTACAAATTCTGCACACCCAATGAGAGCTCAAGACCTAGCAAATGTTACTTCTTACAGGGAGTGGGTATTATTTGGCTATCTAGTTTGTCCAGATGAGCTTCTTAGAGTCACCAGCATTGATATTGCTTTGGTTGTACTAAAGGAACATTTAGTTCTTACATTGTTTAGGGATGAGTACATACTATTACACGAGGATTATCAGTTATATGTCTTGCCACGAATTTTGGAATCAAAGAAGATGGCAAAATCTGGACGCACAAAACAAAAAGAAGCAGATCTGGAGTACAGTGTTGCCAAGCAGGTTGAGAAAATGATAAGGAAAGCACTCGGCCGCAGCAAAGGACCACCGGAAAAACACTCGGTAACAGCAAAGGACTGCAGGAAAACACTTGGCCACAGCAAAAGACCACCGGAAAAACACTCAGTTGCATCACCTGGAAGCACTCGGCAGCAACACGGGACAACGGAAAACACTCGGCTGAAATTCCTTACCGTGATCATTTGGTGGTTCCTCCAGATGGTATTTTCTGCCTTGGCTTTAGCTCAAAGCGAGGTTATATGGTATTTCCAACATGTGGGAATTGCATCATCAAAATCTAAATCTTCTCGAATGGTGGCAGTAGACATAGATCCAAGTGATCCAACCATTGGATTCTTATTGGATGGGATGGATCGCCTTTGCTGTCTTGTGCGCAAGTATATTGCAGCAATCAGAGGCTATGCATTGTCATATCTATCATCCTGTGCTGGTAGAATCCGTTTCTTGCTGGGTACTCCTGGAATGGTGGCCCTTGACCTGGATTCAACTTTGAAAGGACTCTTCCAAAAAATTGTTCAGCATCTTGAAAACATACCGAAACCACAGGGGGAAAATATTTCTGCCATCACATGCGATTTATCTGAGTTACGCAAGGACTGGCTATCAGTATTGATGATTGTCACGTCTGCTCGGGCATCTATAAACATCAGACATTTAGAAAAAGCTACAGTATCTACTGGAAAGGAAGGGTTACTGTCGGAAGGAAATGCCGCATATAACTGGTCCAGATGTGTTGATGAACTTGAATCTCAACTTTCAAAGCATGGGAGTCTGAAAAAGCTATACTTCTATCATCAGCATCTTACGACTGTTTTCAGGAACACCATGTTTGGACCTGAAGGGCGACCTCAACATTGCTGTGCATGGCTTGGTGTTGCTAGTAGTTTTCCAGAATGTGCTTCTGCAATTGTTCCAGAAGAGGTTACTAAAATTGGTCGAGATGCAGTTCTATATGTTGAGTCCCTTATTGAATCCATAATGGGAGGATTGGAAGGGCTAATCAACATTCTTGACTCTGAAGGAGGATTTGGCTCTCTGGAGATGCAGCTTTTCCCGGAGCAGGCAGCTGTACTTATGAATTTAACATCTAGGGGTTCAATGCATTCAACAAAATCCCCAAGGGGCATGGCTGGTTTTCACTTTCCAGGCTATGAAAGCTATCCCGAAAATAATAATTCTATCAAAATGTTAGAAGCTGCAATGCAGAGGTTGACAAATCTTTGCTCGGTTCTAAATGACATGGAGCCTATATGCGTTCTTAATCATGTTTTTGTTCTGAGGGAGTACATGAGAGAGTGCATCCTCGGGAACTTCAAGAGAAGATTGCTTGCAGTCCTAAAAACCGATAATGATCTTCAGCGTCCTTCAGTTCTTGAATCACTTATCCGTAGACACATAAGTATAGTACATCTAGCAGAGCAGCACATCAGCATGGACCTGACTCAGGGTATCCGAGAAGTTTTACTGACAGAAGCCTTTGCGGGCCCCGTTTCCGCTCTCCACTTGTTCGAAAAGCCTGTGGAGCAACACACTGGATCGGCCACCGAAGTTGTCTGCAACTGGTACATTGAAAACATTGTCAAGGACATGTCCGGGGCTGGGATCCTCTATGCTCCACTCAACAGATGCTTTAAGAGCACAAGACCCGTTGCCGGAGGTTACTTTGCCGAGTCAGTGACCGATCTCAGAGAGTTACAAGCATTTGTTCGTATGTTTGGCGGTTACGGAGTTGATCGGTTAGACCGAATGCTGAAAGAACATACGGCTGCACTTTTGAATTGCATCGACACTTCACTGCGAGCAAACCGTGAGGCACTTGACGCCCTTGCTGCAAGTATTCATGACCAAATTGAAAGAGAAGCAAACATGAAGCAGATTATTGATGTCGAAACAGTGGTTGGGTTCTGTATTCAGGCTGGTCAAGCCATCGCTTTTGATGGCCTTTTATCCGAAGCGGCTGGGACTGTGCTCGAAGAAGGTGCACCGTTGATACATTCGTTACTAGCCGGGGTTTCGAAGCATTTACCTGATGAAATACCCGAAAAGAAGGAAATTAGGAGGATGAGAAGGGTAGCAAATGGTGTTGGCGTACTTGATGATCATGATTCTGAGTGGGTGAGATCGATCCTGGAGGATGTTGGGGGTGCAAACGATGGTTCGTGGAGCTTGCTACCTTACTTATTTGCTACTTTTATGACATCTAGTATATGGAGTACAACTGCCTTCAATGTAGACACTGGGGGCTTCAACAACAACGTCCACTGCTTGGCAAGGTGTGTTTGTTCTGTGATTGCGGGAAGTGAATTTGTTAGAATGGAAAGGGAACATCAGCAGAGACAGTCTTTTTCAAATGGTCATGTTGGGGAGCCATTAGATACTGAAATACCCAATCGTTTGTCCACCGAAACAAGCATAAAGTCCACAATGCAGCTCTTTGTTAAGATTTCTGCGGGGATCATACTAGATTCTGGGAGTGAATTCGACAGGTCTCATATTGTAGCAAAGTTAATCTTCCTGGACCAATTCTGTGAAATCTCTCCATACTTGCCAAGGAGTGCACTCGAACCACACGTACCATACTCCATTCTCCGTTCCATATATAGCCAGTACTACACCAATTCTCCTTCCACCCAAATGCTTGCATTATTAAGCGTATCATCTCCTCGCCATTCGCCCGCCGTATCTCTATCACATGCATCTCCCATTACCAGGCAAGCGCGTGGAGATTCTACTCCTCAGTCAAGTGTGAACGATTCCGGTTACTTCAAGCCATCCTCAATCCATAACCAAGATGATAGTGGAAGCTTAAGAAGCATTGACAGCAAGCACAGGAACGTGAGGCGGTCAGGCCCGCTTGAGTACGGCTCAAACCGCAAGACCAAGTTGGCAGAAGGGTCTAGCTCGGGAAGCACAGGTCCCAGTCCACTTCCAAGGTTTGCAGTTTCAAGATCTGGTCCTCTTTCATACAAGTAG
Network for GWHGAAZE004285
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF09735.10
Nckap1
79
194
1.10E-14
PF09735.10
Nckap1
196
384
2.70E-51
PF09735.10
Nckap1
457
1263
8.80E-236
Protein Sequence
>GWHPAAZE004288 GTRCNKMAKSRQHFPTQDVLSSSPRSREWEGPSRWTEYLSQEMTPPLSSRTSRNVGSEGTAQSSGGSHKGLNMQWVYQLTQVAQGLMAKMYRLNQILDYPDSVGHVFSEAFWKAGVFPNHPKLCVFLSKKFPEHHSRLQVERVDKVALDSLNDHAEVHLQSLEPWVQLLLDLMAFREQALRLILDLSSTVITLLLPRKMMLQLYNLLHAMLRNDRDCDFYHRLLQFIDSYDPPLKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPFHPRYPDILTNSAHPMRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALVVLKEHLVLTLFRDEYILLHEDYQLYVLPRILESKKMAKSGRTKQKEADLEYSVAKQVEKMIRKALGRSKGPPEKHSVTAKDCRKTLGHSKRPPEKHSVASPGSTRQQHGTTENTRLKFLTVIIWWFLQMVFSALALAQSEVIWYFQHVGIASSKSKSSRMVAVDIDPSDPTIGFLLDGMDRLCCLVRKYIAAIRGYALSYLSSCAGRIRFLLGTPGMVALDLDSTLKGLFQKIVQHLENIPKPQGENISAITCDLSELRKDWLSVLMIVTSARASINIRHLEKATVSTGKEGLLSEGNAAYNWSRCVDELESQLSKHGSLKKLYFYHQHLTTVFRNTMFGPEGRPQHCCAWLGVASSFPECASAIVPEEVTKIGRDAVLYVESLIESIMGGLEGLINILDSEGGFGSLEMQLFPEQAAVLMNLTSRGSMHSTKSPRGMAGFHFPGYESYPENNNSIKMLEAAMQRLTNLCSVLNDMEPICVLNHVFVLREYMRECILGNFKRRLLAVLKTDNDLQRPSVLESLIRRHISIVHLAEQHISMDLTQGIREVLLTEAFAGPVSALHLFEKPVEQHTGSATEVVCNWYIENIVKDMSGAGILYAPLNRCFKSTRPVAGGYFAESVTDLRELQAFVRMFGGYGVDRLDRMLKEHTAALLNCIDTSLRANREALDALAASIHDQIEREANMKQIIDVETVVGFCIQAGQAIAFDGLLSEAAGTVLEEGAPLIHSLLAGVSKHLPDEIPEKKEIRRMRRVANGVGVLDDHDSEWVRSILEDVGGANDGSWSLLPYLFATFMTSSIWSTTAFNVDTGGFNNNVHCLARCVCSVIAGSEFVRMEREHQQRQSFSNGHVGEPLDTEIPNRLSTETSIKSTMQLFVKISAGIILDSGSEFDRSHIVAKLIFLDQFCEISPYLPRSALEPHVPYSILRSIYSQYYTNSPSTQMLALLSVSSPRHSPAVSLSHASPITRQARGDSTPQSSVNDSGYFKPSSIHNQDDSGSLRSIDSKHRNVRRSGPLEYGSNRKTKLAEGSSSGSTGPSPLPRFAVSRSGPLSYK
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K05750
NCKAP1, NAP125
Regulation of actin cytoskeleton
map04810
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
29.959
SRR3591706
second leaf
14.322
SRR3591707
mature leaf
10.992
SRR3591708
Shoot apex
21.081
SRR3591709
Stem
25.619
SRR3591710
White floral bud
10.956
SRR3591711
White flower
14.150
SRR3591712
Green floral bud
14.459
SRR3591713
Yellow flower
9.589
SRP173429
SRR8316895
Juvenile bud stage
11.160
SRR8316896
Juvenile bud stage
14.285
SRR8316897
Juvenile bud stage
7.844
SRR8316894
Third green stage
6.074
SRR8316900
Third green stage
13.439
SRR8316901
Third green stage
12.385
SRR8316898
Complete white stage
2.629
SRR8316899
Complete white stage
15.031
SRR8316903
Complete white stage
6.493
SRR8316902
Silver flowering stage
3.278
SRR8316904
Silver flowering stage
5.180
SRR8316905
Silver flowering stage
2.234
SRR8316906
Gold flowering stage
6.312
SRR8316907
Gold flowering stage
7.101
SRR8316908
Gold flowering stage
6.969
SRP132670
SRR6706286
Control
11.899
SRR6706287
Light intensity 50%
12.864
SRR6706288
Light intensity 20%
13.552
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
12.410
CNS0095593
Slightly white alabastrum(diploid) 2
10.545
CNS0095594
Slightly white alabastrum(diploid) 3
10.093
CNS0095595
Whole white alabastrum(diploid) 2
7.929
CNS0095596
Whole white alabastrum(diploid) 3
7.342
CNS0095597
Whole white alabastrum(diploid) 4
8.409
CNS0095598
Silvery flower (diploied) 1
11.099
CNS0095599
Silvery flower (diploied) 2
8.769
CNS0095600
Silvery flower (diploied) 3
12.323
CNS0095601
Golden flower (diploid) 1
9.001
CNS0095602
Golden flower (diploid) 2
12.849
CNS0095603
Golden flower (diploid) 3
12.973
CNS0095604
Slightly white alabastrum(tetraploid) 1
10.823
CNS0095605
Slightly white alabastrum(tetraploid) 2
9.290
CNS0095606
Slightly white alabastrum(tetraploid) 3
24.458
CNS0095607
Whole white alabastrum(tetraploid) 1
7.132
CNS0095608
Whole white alabastrum(tetraploid) 2
4.889
CNS0095609
Whole white alabastrum(tetraploid) 3
14.931
CNS0095610
Silvery flower (tetraploid) 1
13.962
CNS0095611
Silvery flower (tetraploid) 2
14.014
CNS0095612
Silvery flower (tetraploid) 3
10.896
CNS0095613
Golden flower (tetraploid) 1
6.441
CNS0095614
Golden flower (tetraploid) 2
11.095
CNS0095615
Golden flower (tetraploid) 3
7.471
CRA001975
CRR073297
Stem 1
19.899
CRR073298
Stem 2
18.155
CRR073299
Stem 3
13.758
CRR073300
Leaf 1
17.801
CRR073301
Leaf 2
16.462
CRR073302
Leaf 3
10.360
CRR073303
Juvenile bud 1
11.867
CRR073304
Juvenile bud 2
7.326
CRR073305
Juvenile bud 3
17.661
CRR073306
Third green 1
2.738
CRR073307
Third green 2
2.338
CRR073308
Third green 3
3.590
CRR073309
Second white 1
3.954
CRR073310
Second white 2
4.935
CRR073311
Second white 3
4.893
CRR073312
Silver flowering 1
3.570
CRR073313
Silver flowering 2
3.979
CRR073314
Silver flowering 3
4.019
CRR073315
Gold flowering 1
5.492
CRR073316
Gold flowering 2
10.290
CRR073317
Gold flowering 3
6.224
CRR073318
Tawny withering 1
20.838
CRR073319
Tawny withering 2
15.580
CRR073320
Tawny withering 3
23.441