Detail information of GWHGAAZE004295


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009340308.10PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1-like [Pyrus x bretschneideri]
COGYP_003248329.15E-55UTP--glucose-1-phosphate uridylyltransferase
Swissprottr|O64765|UAP2_ARATH0UDP-N-acetylglucosamine diphosphorylase 2
trEMBLtr|D7T9N2|D7T9N2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27203.3}
TAIR10AT2G35020.12E-176N-acetylglucosamine-1-phosphate uridylyltransferase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene114706686114715930-
GWHAAZE00000001mRNA114706686114715930-
GWHAAZE00000001exon114715802114715930-
GWHAAZE00000001exon114715340114715394-
GWHAAZE00000001exon114715094114715245-
GWHAAZE00000001exon114713860114713899-
GWHAAZE00000001exon114713249114713341-
GWHAAZE00000001exon114713062114713174-
GWHAAZE00000001exon114712935114712980-
GWHAAZE00000001exon114712104114712186-
GWHAAZE00000001exon114711950114712027-
GWHAAZE00000001exon114710087114710230-
GWHAAZE00000001exon114709795114709830-
GWHAAZE00000001exon114707610114707766-
GWHAAZE00000001exon114706686114706783-
GWHAAZE00000001CDS114715802114715930-
GWHAAZE00000001CDS114715340114715394-
GWHAAZE00000001CDS114715094114715245-
GWHAAZE00000001CDS114713860114713899-
GWHAAZE00000001CDS114713249114713341-
GWHAAZE00000001CDS114713062114713174-
GWHAAZE00000001CDS114712935114712980-
GWHAAZE00000001CDS114712104114712186-
GWHAAZE00000001CDS114711950114712027-
GWHAAZE00000001CDS114710087114710230-
GWHAAZE00000001CDS114709795114709830-
GWHAAZE00000001CDS114707610114707766-
GWHAAZE00000001CDS114706686114706783-
Transcript Sequence

Network for GWHGAAZE004295

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01704.19UDPGP512115.40E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00972UAP1 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0070569molecular_functionuridylyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf112.603
SRR3591706second leaf40.940
SRR3591707mature leaf27.667
SRR3591708Shoot apex48.507
SRR3591709Stem61.508
SRR3591710White floral bud41.034
SRR3591711White flower15.213
SRR3591712Green floral bud44.923
SRR3591713Yellow flower17.674
SRP173429 SRR8316895Juvenile bud stage 6.850
SRR8316896Juvenile bud stage 10.906
SRR8316897Juvenile bud stage 13.054
SRR8316894Third green stage 5.606
SRR8316900Third green stage 13.622
SRR8316901Third green stage 14.674
SRR8316898Complete white stage 4.416
SRR8316899Complete white stage 14.503
SRR8316903Complete white stage 5.645
SRR8316902Silver flowering stage1.877
SRR8316904Silver flowering stage2.883
SRR8316905Silver flowering stage1.102
SRR8316906Gold flowering stage 2.177
SRR8316907Gold flowering stage 2.403
SRR8316908Gold flowering stage 6.335
SRP132670SRR6706286Control11.771
SRR6706287Light intensity 50%11.196
SRR6706288Light intensity 20%13.758
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.092
CNS0095593Slightly white alabastrum(diploid) 215.838
CNS0095594Slightly white alabastrum(diploid) 313.413
CNS0095595Whole white alabastrum(diploid) 28.946
CNS0095596Whole white alabastrum(diploid) 33.919
CNS0095597Whole white alabastrum(diploid) 48.153
CNS0095598Silvery flower (diploied) 118.034
CNS0095599Silvery flower (diploied) 213.132
CNS0095600Silvery flower (diploied) 35.665
CNS0095601Golden flower (diploid) 110.866
CNS0095602Golden flower (diploid) 29.598
CNS0095603Golden flower (diploid) 38.615
CNS0095604Slightly white alabastrum(tetraploid) 117.644
CNS0095605Slightly white alabastrum(tetraploid) 217.296
CNS0095606Slightly white alabastrum(tetraploid) 316.848
CNS0095607Whole white alabastrum(tetraploid) 115.589
CNS0095608Whole white alabastrum(tetraploid) 212.732
CNS0095609Whole white alabastrum(tetraploid) 310.378
CNS0095610Silvery flower (tetraploid) 11.733
CNS0095611Silvery flower (tetraploid) 21.934
CNS0095612Silvery flower (tetraploid) 32.850
CNS0095613Golden flower (tetraploid) 17.156
CNS0095614Golden flower (tetraploid) 23.124
CNS0095615Golden flower (tetraploid) 34.585
CRA001975CRR073297Stem 119.502
CRR073298Stem 221.652
CRR073299Stem 310.468
CRR073300Leaf 129.725
CRR073301Leaf 228.471
CRR073302Leaf 318.835
CRR073303Juvenile bud 120.149
CRR073304Juvenile bud 29.038
CRR073305Juvenile bud 327.860
CRR073306Third green 14.185
CRR073307Third green 24.238
CRR073308Third green 35.286
CRR073309Second white 10.920
CRR073310Second white 20.653
CRR073311Second white 30.327
CRR073312Silver flowering 10.282
CRR073313Silver flowering 20.922
CRR073314Silver flowering 30.251
CRR073315Gold flowering 19.770
CRR073316Gold flowering 214.365
CRR073317Gold flowering 38.920
CRR073318Tawny withering 147.316
CRR073319Tawny withering 270.039
CRR073320Tawny withering 360.529