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Detail information of GWHGAAZE004405
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010664451.1
0
PREDICTED: uncharacterized protein LOC100266091 isoform X1 [Vitis vinifera]
trEMBL
tr|A0A067KZC7|A0A067KZC7_JATCU
0
Uncharacterized protein {ECO:0000313|EMBL:KDP41537.1}
TAIR10
AT1G27595.1
0
Without detailed annotation
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
116485133
116508935
+
GWHAAZE00000001
mRNA
116485133
116508935
+
GWHAAZE00000001
exon
116485133
116485269
+
GWHAAZE00000001
exon
116487138
116487354
+
GWHAAZE00000001
exon
116488441
116488600
+
GWHAAZE00000001
exon
116489321
116489413
+
GWHAAZE00000001
exon
116491705
116491807
+
GWHAAZE00000001
exon
116491954
116492128
+
GWHAAZE00000001
exon
116495142
116495316
+
GWHAAZE00000001
exon
116495474
116495638
+
GWHAAZE00000001
exon
116495997
116496587
+
GWHAAZE00000001
exon
116496730
116497371
+
GWHAAZE00000001
exon
116501652
116501765
+
GWHAAZE00000001
exon
116501844
116502083
+
GWHAAZE00000001
exon
116502804
116502851
+
GWHAAZE00000001
exon
116503057
116503203
+
GWHAAZE00000001
exon
116504063
116504227
+
GWHAAZE00000001
exon
116504322
116504384
+
GWHAAZE00000001
exon
116504724
116504834
+
GWHAAZE00000001
exon
116504934
116505017
+
GWHAAZE00000001
exon
116505103
116505150
+
GWHAAZE00000001
exon
116505300
116505374
+
GWHAAZE00000001
exon
116506771
116506851
+
GWHAAZE00000001
exon
116506929
116507000
+
GWHAAZE00000001
exon
116507460
116507504
+
GWHAAZE00000001
exon
116507602
116507685
+
GWHAAZE00000001
exon
116507767
116507870
+
GWHAAZE00000001
exon
116508818
116508935
+
GWHAAZE00000001
five_prime_UTR
116485133
116485269
+
GWHAAZE00000001
five_prime_UTR
116487138
116487151
+
GWHAAZE00000001
CDS
116487152
116487354
+
GWHAAZE00000001
CDS
116488441
116488600
+
GWHAAZE00000001
CDS
116489321
116489413
+
GWHAAZE00000001
CDS
116491705
116491807
+
GWHAAZE00000001
CDS
116491954
116492128
+
GWHAAZE00000001
CDS
116495142
116495316
+
GWHAAZE00000001
CDS
116495474
116495638
+
GWHAAZE00000001
CDS
116495997
116496587
+
GWHAAZE00000001
CDS
116496730
116497371
+
GWHAAZE00000001
CDS
116501652
116501765
+
GWHAAZE00000001
CDS
116501844
116502083
+
GWHAAZE00000001
CDS
116502804
116502851
+
GWHAAZE00000001
CDS
116503057
116503203
+
GWHAAZE00000001
CDS
116504063
116504227
+
GWHAAZE00000001
CDS
116504322
116504384
+
GWHAAZE00000001
CDS
116504724
116504834
+
GWHAAZE00000001
CDS
116504934
116505017
+
GWHAAZE00000001
CDS
116505103
116505150
+
GWHAAZE00000001
CDS
116505300
116505374
+
GWHAAZE00000001
CDS
116506771
116506851
+
GWHAAZE00000001
CDS
116506929
116507000
+
GWHAAZE00000001
CDS
116507460
116507504
+
GWHAAZE00000001
CDS
116507602
116507685
+
GWHAAZE00000001
CDS
116507767
116507870
+
GWHAAZE00000001
CDS
116508818
116508935
+
Transcript Sequence
>GWHTAAZE004411 CGCACTTTTTTTTTTCTTTCTCGTCGACGAATATCCCAATCCCCCCTCTCTCGTTCTTAAATTCTCACCCTTTCGCCGGTGGCTCATTTATCGGCGCTGATTCTTCGCCAAAATTCATCTGCCTCGTTGACGACACGATTGTCCGCTTGACATGTCTGGACCACCCCGAGAGCAGGCGCTATCTCTCCTTGCCGCTGCAAACAACCATGGAGATTTGGCGGTAAAGCTGTCTTCTTTGAGACAGGCCAAAGATATTTTGTTTTCCGTGGAGCCATCACTCGCTGGTGAACTTTTCCCCTATTTGGCCGAACTTCAATCTTCGCCGGAAAGTCTTGTTAGGAAAGTCCTTATTGAGGTGATTGAGGAGATTGGATTGAAAGCAATGGAGCATTCTCTGATCCTAATACCTGTGTTATTGACATCATTGAAAGACAATGATGTTGTTGTTGCGAGAAAATCCATTATTGCTGGCACACATATCTTTTGCAGTGTGTTAGAGGAGTTAGCATTGCAGTTTCACCGGCGTGGTATAGTTGAGAGGTGGCTTGAAGAGCTCTGGATATGGATGGTCAAGTTCAAGGATGCTGTTTTTAGCATTTTGTTGGAGGCTGGTTCTATTGGTACGAGGTTGCTGGCAATGAAATTTTTGGAAACCTCTGTATTACTTTTTACATCTGATGCCAATGATTCTGAAAAAACCATTTCAGAAGCTATAACAAGAAATGGACGACTGGCATTTAATGTTTCGTGGCTGGTTGGTGGTCACCCTGTTCTGGATCCAGCGGCACTAATGTCAGAGGCAAATAGATCTTTTGGCGTTATAATGGATTTGTTCAGATCGGCAAGAAGTCTTCCAGGGCCTTTGACAATTTCAGTTGTTAACTGTCTTGCAGCCATCGCAAGGAAGAGGCCGGTCTACTATAGTTCAGTTCTTTCAGCATTACTTGATTTTGATCCAAATTTTGAGATGGCAAAAGGAGGCCATACTGCTAGTATCCATTATTGTCTTCGAACTGCCTTTTTAGGATTCCTAAGGTGTACATATCCACCCATTGTAGAGTCAAAAGAGAGGTTGCGTGAGGCTTTGCGGGCAATGAATGCTGGGGATGCGGTTGATCAAGTTCTTCGACAAGTTGAAAAAATGCAAAGAAATTGCGAGCATGCTTCACGTGATACTCGGTTTAGCAAGGTAATTCACCCTGGAAGTAGAGTTGATGGGTTTCTGGATGAGCAGCCATCAGGTCATCTGCTTGTTTCCCGGGATCTGATGAAAAAAAGGTCTACACCTCTGGATCATGAAGAACCCACTAATAATTATGATATACCTTCCAAGAGGATTCGATATGGCCCTAACTCCTCTGAAGCACCACCAGTGCACATCAGTGATTCTGGTCAAGACTGCTCTGTTAATGGATTATCCCCTAAACTTGCTTCTTTTGGTGGTATTTTGAATCCGGTTGAACAGATGATTGCCATGATTGGTGCTTTAATTGCAGAAGGAGAAAGAGGTGCTGAATCCCTCGAAATTCTTATATCTCAAATCCATCCTGATCTGTTGGCTGATATAGTGATAACCAATATGAAGCACTTGCCTAGAACCTCCCCACCATTAACTAGACTCGGTGCACCTCCACAAAATGGTTTTCAAAGTGGTCCATCGGAGGTTGTGGGGCCTGTTAGTTCTACAATATCTACTCAAACACCAGTTATCTCAGCCCAAGTACCTGTCTCGTATTCAAGTACAATTGGCACATCATTGCCCGATACGCCCACTTCCATTAATCTCCCTGGAGATTGCAAACGTGATCCACGAAGGGATCCCCGGCGCCTTGATCCCCGGCGTGTGGGAGTACCAGTGGCAATGCCAGTGCATGCTGGGGAGGATAATGCAAATGCTATCCAAGCTGCTGCTGTAGAACCAGAGTTGGATGCTTCAATTTCATTGAAGAAGTCACCTCCTCTGCCTGTAGTAACAGGTGCTGAAAATACATCAGTACCTTCAGTTCCCCAGAATGAAACCGGTTTGTATGTTACAGAAACTCCTGTAGTTTCTTGTGCTGATGAACTAGCTCATAAAGAAGAAGTTTTGGATGAAAAGGATGATAAAATTATCCTTGATCCCGAGGAGAATGTTGCTTCAGTTATTCAACTTTCTGTTCCTGAGGTTGAACAGGACCCTGTGGCACCGAATTCCTCTGATTTTACATTTGCAGATGAAAATTATTCGTTGCATTCACTTGAAGCCGACCAGCTTTCTCCTGTTTCTACCACTCCCGTCTTCGAAGAGACACACTGTCCCAATTTACCTGTTGTTCCGTCATATATTGAACTGATGGAAGAGCAGAAAAGAAATGTGAAAAAATTGGCAGTTGAACGGATCATTGACTCGCACAAGCATTTACGAGGGACAGACTATAAGCAGACACGCATGACACTGCTTGCTCGGTTGGTTGCTCAGGGGCACGAGCTTGTAATGCATGTTCTCTATCACCTGCATGCTCTAATGATCTCAGATTCAGTCTCACACTCTTCAGTTGTTGCTGTTGTATATGAAAAGTTCCTCCTGGGAGTGGCGAAATCTTTACTGGATGCTTTCCCAGCAACTGACAAGTCTTTTAGTAGACTTCTTGGCGAAGTTCCTCTTTTACCTGATTCGGTTTTAAAATTGCTGGATGATATATGCTGCTCTGATAATCACTCTGCAAAAGATGTTCGTGATGGTGATCGAGTCACTCAGGGTCTTGGTGCTGTTTGGAGCTTAATTTTAGGGCGTCCGATCAACCGTCAAGCATGCTTGGATATTGCATTGAAGTGTGCTGTCCATTCCCAAGATGATATTCGTGCCAAAGCTATCCGTTTGGTGGCGAACAAGCTCTATTTGGTCAACTACATTTCAGAAAACATTGAGCAATTTGCAACGAATATGCTATTGTCAGCTGTTGGCCAGCGTGTTTCAGATATAGAGCTTTCACATTTTGGATCCACTGAGCAAAGAACAGAGGGGGAGATGGGAAGCCAAGAAACATCCATTAGCGGGTCCCAAATTTCGGAGCCGGGAACCTCTGAAAATGACTCTGCGAAGGGCACACAGTCCGATCCCCAAAGCGATTCCTCAGTGTCGTTCACTCATGCTCAGCGCCACATTTCTTTGTTTTTTGCTCTGTGTACAAAGAAACCTAGTCTTCTTCAACTTGTTTTTGATAATTATGCTCGTGCTCCCAAGGCTGTGAAGCAGGCGGTCCATCGACATATCCCTATTCTTATAAGAGCCCTAGGCTCATCATATTCCGAGTTACTCCATATAATATCCAACCCACCACACGGAAGTGAACATCTTTTGACGCAAGTGTTGCAGATATTATCCGAAGGAACAATACCTTCTGCTGATCTAGTGGCCACTGTTAAACGTTTATACGAAACTAAACTCAAGGATGCTACAATTCTTATTCCAATATTGTCGTCATTTTCCAAAAATGAGGTTTTGCCTATTTTTCCTCGACTTGTTGAGCTTCCACTGGATAAATTTCAGATAGCACTTGCTCACATACTACAGATAACGGAAGTTTGCTCTGCTTGTTTTGAGCAACGCACAGTTTTCACCCAGCAGGTCCTCGCAAGGGCTTTGAACCAGATGGTTGATCAGAGTCCTCTCCCTCTGCTCTTCATGAGAACAGTAATCCAAGCAATTGATGCTTTTCCGGCACTGGTCGATGTTGTAATGGAAATACTCTCTAAACTTGTGAGCAAACAGGTTTGGAGAATGCCCAAGTTGTGGGTTGGTTTCTTGAAATGTGTGTCTCAGACGCAACCACATTCTTTCCGTGTATTATTACAGCTACCACCCCCACAGCTTGAAGGTGCTCTAAACAAATATGGTAACCTCCGAGGTCCGCTAGCTGCATATGCCAACCAGCCTGGTGTAAAAAATTCACTACCCAGATCAACTCTGATACTTCTTGGCCTTGTTACGAACGATACTCATATGCGTCCCCAAGCACATCCCTTGTCTTCTCTTCATTCTTCCGATAAAAGTTCTTCAGTTCATGGACTGACCTGA
Network for GWHGAAZE004405
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF11935.9
DUF3453
96
318
3.40E-46
PF12295.9
Symplekin_C
1134
1240
1.40E-41
Protein Sequence
>GWHPAAZE004408 MSGPPREQALSLLAAANNHGDLAVKLSSLRQAKDILFSVEPSLAGELFPYLAELQSSPESLVRKVLIEVIEEIGLKAMEHSLILIPVLLTSLKDNDVVVARKSIIAGTHIFCSVLEELALQFHRRGIVERWLEELWIWMVKFKDAVFSILLEAGSIGTRLLAMKFLETSVLLFTSDANDSEKTISEAITRNGRLAFNVSWLVGGHPVLDPAALMSEANRSFGVIMDLFRSARSLPGPLTISVVNCLAAIARKRPVYYSSVLSALLDFDPNFEMAKGGHTASIHYCLRTAFLGFLRCTYPPIVESKERLREALRAMNAGDAVDQVLRQVEKMQRNCEHASRDTRFSKVIHPGSRVDGFLDEQPSGHLLVSRDLMKKRSTPLDHEEPTNNYDIPSKRIRYGPNSSEAPPVHISDSGQDCSVNGLSPKLASFGGILNPVEQMIAMIGALIAEGERGAESLEILISQIHPDLLADIVITNMKHLPRTSPPLTRLGAPPQNGFQSGPSEVVGPVSSTISTQTPVISAQVPVSYSSTIGTSLPDTPTSINLPGDCKRDPRRDPRRLDPRRVGVPVAMPVHAGEDNANAIQAAAVEPELDASISLKKSPPLPVVTGAENTSVPSVPQNETGLYVTETPVVSCADELAHKEEVLDEKDDKIILDPEENVASVIQLSVPEVEQDPVAPNSSDFTFADENYSLHSLEADQLSPVSTTPVFEETHCPNLPVVPSYIELMEEQKRNVKKLAVERIIDSHKHLRGTDYKQTRMTLLARLVAQGHELVMHVLYHLHALMISDSVSHSSVVAVVYEKFLLGVAKSLLDAFPATDKSFSRLLGEVPLLPDSVLKLLDDICCSDNHSAKDVRDGDRVTQGLGAVWSLILGRPINRQACLDIALKCAVHSQDDIRAKAIRLVANKLYLVNYISENIEQFATNMLLSAVGQRVSDIELSHFGSTEQRTEGEMGSQETSISGSQISEPGTSENDSAKGTQSDPQSDSSVSFTHAQRHISLFFALCTKKPSLLQLVFDNYARAPKAVKQAVHRHIPILIRALGSSYSELLHIISNPPHGSEHLLTQVLQILSEGTIPSADLVATVKRLYETKLKDATILIPILSSFSKNEVLPIFPRLVELPLDKFQIALAHILQITEVCSACFEQRTVFTQQVLARALNQMVDQSPLPLLFMRTVIQAIDAFPALVDVVMEILSKLVSKQVWRMPKLWVGFLKCVSQTQPHSFRVLLQLPPPQLEGALNKYGNLRGPLAAYANQPGVKNSLPRSTLILLGLVTNDTHMRPQAHPLSSLHSSDKSSSVHGLT
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K06100
SYMPK
mRNA surveillance pathway
map03015
Tight junction
map04530
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
23.181
SRR3591706
second leaf
18.805
SRR3591707
mature leaf
13.932
SRR3591708
Shoot apex
26.491
SRR3591709
Stem
20.329
SRR3591710
White floral bud
21.037
SRR3591711
White flower
25.039
SRR3591712
Green floral bud
20.565
SRR3591713
Yellow flower
20.874
SRP173429
SRR8316895
Juvenile bud stage
11.768
SRR8316896
Juvenile bud stage
14.804
SRR8316897
Juvenile bud stage
8.097
SRR8316894
Third green stage
7.963
SRR8316900
Third green stage
17.563
SRR8316901
Third green stage
17.513
SRR8316898
Complete white stage
5.636
SRR8316899
Complete white stage
21.108
SRR8316903
Complete white stage
14.910
SRR8316902
Silver flowering stage
7.453
SRR8316904
Silver flowering stage
12.300
SRR8316905
Silver flowering stage
5.275
SRR8316906
Gold flowering stage
14.606
SRR8316907
Gold flowering stage
16.432
SRR8316908
Gold flowering stage
16.311
SRP132670
SRR6706286
Control
19.090
SRR6706287
Light intensity 50%
18.642
SRR6706288
Light intensity 20%
20.136
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
8.973
CNS0095593
Slightly white alabastrum(diploid) 2
8.891
CNS0095594
Slightly white alabastrum(diploid) 3
6.918
CNS0095595
Whole white alabastrum(diploid) 2
8.176
CNS0095596
Whole white alabastrum(diploid) 3
6.763
CNS0095597
Whole white alabastrum(diploid) 4
6.758
CNS0095598
Silvery flower (diploied) 1
12.350
CNS0095599
Silvery flower (diploied) 2
10.399
CNS0095600
Silvery flower (diploied) 3
19.456
CNS0095601
Golden flower (diploid) 1
10.906
CNS0095602
Golden flower (diploid) 2
18.075
CNS0095603
Golden flower (diploid) 3
17.579
CNS0095604
Slightly white alabastrum(tetraploid) 1
12.072
CNS0095605
Slightly white alabastrum(tetraploid) 2
8.150
CNS0095606
Slightly white alabastrum(tetraploid) 3
22.272
CNS0095607
Whole white alabastrum(tetraploid) 1
7.115
CNS0095608
Whole white alabastrum(tetraploid) 2
6.302
CNS0095609
Whole white alabastrum(tetraploid) 3
16.120
CNS0095610
Silvery flower (tetraploid) 1
21.716
CNS0095611
Silvery flower (tetraploid) 2
19.062
CNS0095612
Silvery flower (tetraploid) 3
19.688
CNS0095613
Golden flower (tetraploid) 1
9.359
CNS0095614
Golden flower (tetraploid) 2
17.166
CNS0095615
Golden flower (tetraploid) 3
20.621
CRA001975
CRR073297
Stem 1
23.760
CRR073298
Stem 2
22.247
CRR073299
Stem 3
12.837
CRR073300
Leaf 1
22.371
CRR073301
Leaf 2
20.044
CRR073302
Leaf 3
10.758
CRR073303
Juvenile bud 1
11.729
CRR073304
Juvenile bud 2
8.160
CRR073305
Juvenile bud 3
15.726
CRR073306
Third green 1
5.211
CRR073307
Third green 2
4.984
CRR073308
Third green 3
6.838
CRR073309
Second white 1
6.568
CRR073310
Second white 2
7.592
CRR073311
Second white 3
8.140
CRR073312
Silver flowering 1
9.982
CRR073313
Silver flowering 2
11.600
CRR073314
Silver flowering 3
8.675
CRR073315
Gold flowering 1
4.349
CRR073316
Gold flowering 2
8.996
CRR073317
Gold flowering 3
5.984
CRR073318
Tawny withering 1
11.529
CRR073319
Tawny withering 2
12.036
CRR073320
Tawny withering 3
10.987