Detail information of GWHGAAZE004612


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI30654.31.56476E-58unnamed protein product [Vitis vinifera]
Swissprottr|Q9MAH8|TCP3_ARATH4E-40Transcription factor TCP3
trEMBLtr|D7TJI2|D7TJI2_VITVI6E-59Putative uncharacterized protein {ECO:0000313|EMBL:CBI30654.3}
TAIR10AT3G15030.31E-32TCP family transcription factor 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene119662871119663788+
GWHAAZE00000001mRNA119662871119663788+
GWHAAZE00000001exon119662871119663788+
GWHAAZE00000001CDS119662871119663788+
Transcript Sequence

Network for GWHGAAZE004612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP341304.30E-30
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.830
SRR3591706second leaf1.035
SRR3591707mature leaf0.000
SRR3591708Shoot apex5.320
SRR3591709Stem0.613
SRR3591710White floral bud7.232
SRR3591711White flower0.773
SRR3591712Green floral bud41.877
SRR3591713Yellow flower0.249
SRP173429 SRR8316895Juvenile bud stage 6.400
SRR8316896Juvenile bud stage 5.069
SRR8316897Juvenile bud stage 4.595
SRR8316894Third green stage 5.535
SRR8316900Third green stage 18.558
SRR8316901Third green stage 18.205
SRR8316898Complete white stage 1.133
SRR8316899Complete white stage 9.877
SRR8316903Complete white stage 2.508
SRR8316902Silver flowering stage0.139
SRR8316904Silver flowering stage0.276
SRR8316905Silver flowering stage0.053
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control9.106
SRR6706287Light intensity 50%11.337
SRR6706288Light intensity 20%13.995
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.278
CNS0095593Slightly white alabastrum(diploid) 27.307
CNS0095594Slightly white alabastrum(diploid) 32.766
CNS0095595Whole white alabastrum(diploid) 211.942
CNS0095596Whole white alabastrum(diploid) 315.712
CNS0095597Whole white alabastrum(diploid) 410.236
CNS0095598Silvery flower (diploied) 10.290
CNS0095599Silvery flower (diploied) 20.062
CNS0095600Silvery flower (diploied) 30.271
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 112.243
CNS0095605Slightly white alabastrum(tetraploid) 210.209
CNS0095606Slightly white alabastrum(tetraploid) 319.796
CNS0095607Whole white alabastrum(tetraploid) 13.583
CNS0095608Whole white alabastrum(tetraploid) 29.376
CNS0095609Whole white alabastrum(tetraploid) 312.753
CNS0095610Silvery flower (tetraploid) 10.441
CNS0095611Silvery flower (tetraploid) 20.193
CNS0095612Silvery flower (tetraploid) 30.854
CNS0095613Golden flower (tetraploid) 10.150
CNS0095614Golden flower (tetraploid) 20.172
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 121.628
CRR073298Stem 221.194
CRR073299Stem 325.930
CRR073300Leaf 129.737
CRR073301Leaf 220.115
CRR073302Leaf 330.184
CRR073303Juvenile bud 123.678
CRR073304Juvenile bud 241.248
CRR073305Juvenile bud 311.680
CRR073306Third green 13.314
CRR073307Third green 26.910
CRR073308Third green 34.742
CRR073309Second white 10.334
CRR073310Second white 20.456
CRR073311Second white 30.079
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.083
CRR073315Gold flowering 10.193
CRR073316Gold flowering 20.155
CRR073317Gold flowering 31.027
CRR073318Tawny withering 10.182
CRR073319Tawny withering 20.153
CRR073320Tawny withering 30.462