Gene detail

Detail information of GWHGAAZE004777

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AFG28175.1	0	putative anthocyanidin reductase [Vitis bellula]
Swissprot	tr\|Q9SEV0\|BAN_ARATH	2E-149	Anthocyanidin reductase
trEMBL	tr\|H9TZS7\|H9TZS7_9ROSI	0	Putative anthocyanidin reductase {ECO:0000313\|EMBL:AFG28175.1}
TAIR10	AT1G61720.1	2E-120	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	122151587	122153820	-
GWHAAZE00000001	mRNA	122151587	122153820	-
GWHAAZE00000001	exon	122153703	122153820	-
GWHAAZE00000001	exon	122153230	122153396	-
GWHAAZE00000001	exon	122152949	122153146	-
GWHAAZE00000001	exon	122152623	122152782	-
GWHAAZE00000001	exon	122152173	122152386	-
GWHAAZE00000001	exon	122151587	122151948	-
GWHAAZE00000001	CDS	122153703	122153820	-
GWHAAZE00000001	CDS	122153230	122153396	-
GWHAAZE00000001	CDS	122152949	122153146	-
GWHAAZE00000001	CDS	122152623	122152782	-
GWHAAZE00000001	CDS	122152173	122152386	-
GWHAAZE00000001	CDS	122151804	122151948	-
GWHAAZE00000001	three_prime_UTR	122151587	122151803	-

Transcript Sequence
>GWHTAAZE004783 ATGGCAGCTCAACAACCTACTGCGTGTGTTGTGGGAGGCACCGGTTTTGTTGCATCTTCGCTCATAAAGCTATTGCTTGAGAAAGGCTACTCTGTTAATGCCACTGTTAGAGATCCTGATAATCAGAAAAAGGTTTCTCACCTTCTAGCACTGGAGAGTTTGGGCAGCTTAAAAATCTTCAAAGCAGACTTAACCGACGAAACGAGCTTCGATGCTCCTGTGACTGGCTGTGATCTAGTGTTCCACGTTGCAACCCCTGTCAACTTTGATTCTCAAGATCCAGAGAATGACATGATAAAACCAGCAATCCAAGGTGTCCTCAATGTTTTAAAAGCTTGTAAAAAAGCCGGAACAAAACGCGTCGTTTTGACATCATCGGCAGCTACAGTATCAATCAATCAGCTCAACGGGACAGGTCTGGTTATGGATGAGTCCAACTGGAGCGATGTTGAGTTTTTGACTACTGTCAAGCCACCCACCTGGGGATATCCAGTCTCTAAGACACTAGCTGAAAAGGCAGCGTGGAAATTTGCTGAAGAAAATAAGATTGATCTGATTACTGTCATTCCTAGTCTCATGGCTGGTTCTTCCCTCACTTCGGACATCCCCAGCAGTATCGATCTAGCCACTGCCTTGATCACCGGGAATGAGGTCCTCTTAAATGCGATGAAAGGTATGCAGATGCTTTCGGGTTCAATCTCGATTTCACATGTGGAGGATGTATGCCGCGCCCAAATGCTTGTGGCTGAAAAAGAATCGGCTTCTGGGCGTTACATTTGCTGTGCCGTCAATACTAGTGTTCCTGAGCTGGCTAAGTTCCTCGAGAAAAGATACCCCCAATACAACGTCCCTGCCGATTTTGGAGATTTCCCCTCTAAGGCAAAATTGATACTCTCATCGGAAAAGCTTATCAAGGAGGGGTTCAGTTTTAAGTACGGGATCAAAGAAATTTACGACGAATCTGTGGCCTACTTCAAGGCCAAAGGGTTACTGCAGAACTGACGTACCTTATGTTTTCTCTGTTGTGGCTAAAAATCAGTGTGGCTATTGTGTGTACTATGTATTCACCTGGCAGTGCTTTTTTTTTTCTTTTTCCCTTGTTCGTAAGAATGCTTCTTTAATAACTTCTTTCGTTTGGAAGATTAGCTTTGTGGAATCACCAATTATTGAAATATATGTGAGTAGCCATGACAATAGCCTACTTTATTGCCTGGAAAGA

Network for GWHGAAZE004777

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0011

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01370.22	Epimerase	9	252	1.90E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K08695	ANR	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Flavonoid biosynthesis	map00941

Gene Ontology

GO term	Ontology	Name
GO:0003824	molecular_function	catalytic activity
GO:0050662	molecular_function	coenzyme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.176
	SRR3591707	mature leaf	0.234
	SRR3591708	Shoot apex	3.638
	SRR3591709	Stem	85.947
	SRR3591710	White floral bud	19.366
	SRR3591711	White flower	10.670
	SRR3591712	Green floral bud	1.044
	SRR3591713	Yellow flower	0.080
SRP173429	SRR8316895	Juvenile bud stage	18.829
	SRR8316896	Juvenile bud stage	5.406
	SRR8316897	Juvenile bud stage	0.517
	SRR8316894	Third green stage	3.864
	SRR8316900	Third green stage	2.585
	SRR8316901	Third green stage	0.848
	SRR8316898	Complete white stage	0.038
	SRR8316899	Complete white stage	25.143
	SRR8316903	Complete white stage	4.657
	SRR8316902	Silver flowering stage	0.040
	SRR8316904	Silver flowering stage	0.069
	SRR8316905	Silver flowering stage	0.056
	SRR8316906	Gold flowering stage	0.126
	SRR8316907	Gold flowering stage	0.143
	SRR8316908	Gold flowering stage	0.052
SRP132670	SRR6706286	Control	0.743
	SRR6706287	Light intensity 50%	1.631
	SRR6706288	Light intensity 20%	1.723
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	61.063
	CNS0095593	Slightly white alabastrum(diploid) 2	25.532
	CNS0095594	Slightly white alabastrum(diploid) 3	46.208
	CNS0095595	Whole white alabastrum(diploid) 2	37.469
	CNS0095596	Whole white alabastrum(diploid) 3	1.238
	CNS0095597	Whole white alabastrum(diploid) 4	14.843
	CNS0095598	Silvery flower (diploied) 1	23.994
	CNS0095599	Silvery flower (diploied) 2	24.266
	CNS0095600	Silvery flower (diploied) 3	10.024
	CNS0095601	Golden flower (diploid) 1	29.633
	CNS0095602	Golden flower (diploid) 2	8.952
	CNS0095603	Golden flower (diploid) 3	8.846
	CNS0095604	Slightly white alabastrum(tetraploid) 1	25.730
	CNS0095605	Slightly white alabastrum(tetraploid) 2	21.486
	CNS0095606	Slightly white alabastrum(tetraploid) 3	33.332
	CNS0095607	Whole white alabastrum(tetraploid) 1	24.521
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.184
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.109
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	6.037
	CNS0095612	Silvery flower (tetraploid) 3	1.296
	CNS0095613	Golden flower (tetraploid) 1	0.317
	CNS0095614	Golden flower (tetraploid) 2	0.056
	CNS0095615	Golden flower (tetraploid) 3	0.057
CRA001975	CRR073297	Stem 1	10.158
	CRR073298	Stem 2	5.546
	CRR073299	Stem 3	4.209
	CRR073300	Leaf 1	1.695
	CRR073301	Leaf 2	2.839
	CRR073302	Leaf 3	0.978
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.049
	CRR073305	Juvenile bud 3	1.225
	CRR073306	Third green 1	0.097
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.161
	CRR073309	Second white 1	0.495
	CRR073310	Second white 2	0.627
	CRR073311	Second white 3	1.341
	CRR073312	Silver flowering 1	1.466
	CRR073313	Silver flowering 2	2.795
	CRR073314	Silver flowering 3	1.783
	CRR073315	Gold flowering 1	0.389
	CRR073316	Gold flowering 2	0.072
	CRR073317	Gold flowering 3	0.809
	CRR073318	Tawny withering 1	37.339
	CRR073319	Tawny withering 2	33.754
	CRR073320	Tawny withering 3	31.392