Gene detail

Detail information of GWHGAAZE004811

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDO99725.1	0	unnamed protein product [Coffea canephora]
Swissprot	tr\|O80689\|BGL45_ARATH	0	Beta-glucosidase 45 (Precursor)
trEMBL	tr\|A0A068TTX5\|A0A068TTX5_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_4 {ECO:0000313\|EMBL:CDO99725.1}
TAIR10	AT1G61810.1	4E-180	beta-glucosidase 45

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	122752829	122757651	+
GWHAAZE00000001	mRNA	122752829	122757651	+
GWHAAZE00000001	exon	122752829	122753062	+
GWHAAZE00000001	exon	122753175	122753420	+
GWHAAZE00000001	exon	122755126	122755201	+
GWHAAZE00000001	exon	122755326	122755400	+
GWHAAZE00000001	exon	122755628	122755715	+
GWHAAZE00000001	exon	122755968	122756220	+
GWHAAZE00000001	exon	122756408	122756523	+
GWHAAZE00000001	exon	122756705	122756960	+
GWHAAZE00000001	exon	122757053	122757155	+
GWHAAZE00000001	exon	122757238	122757346	+
GWHAAZE00000001	exon	122757456	122757651	+
GWHAAZE00000001	CDS	122752829	122753062	+
GWHAAZE00000001	CDS	122753175	122753420	+
GWHAAZE00000001	CDS	122755126	122755201	+
GWHAAZE00000001	CDS	122755326	122755400	+
GWHAAZE00000001	CDS	122755628	122755715	+
GWHAAZE00000001	CDS	122755968	122756220	+
GWHAAZE00000001	CDS	122756408	122756523	+
GWHAAZE00000001	CDS	122756705	122756960	+
GWHAAZE00000001	CDS	122757053	122757155	+
GWHAAZE00000001	CDS	122757238	122757346	+
GWHAAZE00000001	CDS	122757456	122757651	+

Transcript Sequence
>GWHTAAZE004817 CACATTGTAATTGTATATATATATATATATATAAGAATGGAAGTACATGCATTACTGCTACTATTGTTTCTTGTTTTCTTCATCTTCATTGCATTTGGAATGTTTTCATCTATGGGGGTGGTGGTGGTGGTATCATGTAATTTGACTAATAATAATAATATTACCTCTCTCAGAGGAACTCCATCTCCATTTCCAACCAACTTCTTATTTGGAACTGCCTCCTCTTCTTATCAGTTTGAAGGGGCTTTCTTGAGTGATGGAAAAGGACTCAATAATTGGGATGTTTTCTCTCATAAAACTGGTCAGACTAATTACTCACCACCCTCTTTTACTTCCCTTGCAAATATTTTATCTGCCTTCTCATTATTGTCTCTCTCTATATATATATATATATATGATAATGATATTGCGACTGCTGCAGGTAATATAATGGACGGAAGTAATGGAGATATTGCTGTTGATCATTACCACCGTTATCTGGAAGATCTGGAACTCATGGAATACATTGGGGTGAATAGCTTCCGTTTCTCTATATCATGGACAAGAATTCTACCTAAGGGACGATATGGAAATGTGAATATGGCTGGCATCAAACACTATAACAAGCTCATTGATGCTCTTCTGCATAGAGGGATTCAACCATTTGTGTCATTGACCCATTACGACATCCCTCAAGAACTTGAAGATAGATATGGAGCATGGCTAAGTCCCCAAGTGCAGAAGGATTTCAAATACTATGCAGATGTGTGCTTCAAATACTTTGGGGACAGAGTAAAGTACTGGGTTACCTTCAATGAGCCCAATGTTGTAGCAATTCGTGGTTACCGATCGGGTATCTATCCACCATCTCGTTGCTCGGGTTCATTTGGGAATTGCAGTTTTGGGGATTCCGAGAGAGAGCCTTTCATTGCAGTTCACCATATGATCCTATCCCATGCACTTGCTGTCAACATTTACAGAACAAAATATCAGAACAAGCTAAAAGGTAGCATTGGAGTAGTTATGAATGCCATATGGTTCGAACCCTACAGTAATTCCTCAGAAGACAATTTAGCAGCTGAGAGAGCTCAATCCTTTTTTATGAATTGGTTCTTGGATCCAATTATACTGGGAAAATATCCTAAAGAAATGCGTGATATTCTAGGATCTTTACTGCCCGACTTCTCTAAAAATGATCTAGAGAAGCTGAAGAATGGAGTAGACTTTATTGGCATCAATCACTATACTAGTTTCTACATCAAAGATTGCATATACTCTAAATGCGAACAAGGACCAGGAATTACAAGGACAGAGGGCTATGCTCTTCGAACTGCACTAAAAGATGGTGTCCTCATTGGAGAATCGACAGCAGTCGACTGGCTATATGTTTACCCTCAAGGAATGGAAAAGGTGGTGACATATGTGAAATATAGATACAATAATACACCCATGTTCATCACAGAAAATGGGTTTGGAGATATGAATAATCCGAATTCAAGTATCAGAGAATCCCTCAATGATGTCAAAAGGGTGGAGTATATGAAGAACTACTTGGATGCCCTAGCAGCAGCGATATGGAAAGGAGCAGATGTGAGAGGGTACTTCGCGTGGTCCTTACTCGACAACTTCGAGTGGATTTCTGGATATACAATAAGATTTGGGCTTCACCATGTTGATTATGAAACCCTTGAGAGAACTGCGAAGTTATCATCAACTTGGTACAAACAGTTCATTGCAGATCATATGGCTCGCAGAGATTATAGTGCCTGGTAA

Network for GWHGAAZE004811

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00232.19	Glyco_hydro_1	62	104	1.20E-11
PF00232.19	Glyco_hydro_1	138	574	2.10E-136

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05350	bglB	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Starch and sucrose metabolism	map00500
		Cyanoamino acid metabolism	map00460
		Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0004553	molecular_function	hydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	6.945
	SRR3591706	second leaf	0.684
	SRR3591707	mature leaf	0.871
	SRR3591708	Shoot apex	3.763
	SRR3591709	Stem	8.809
	SRR3591710	White floral bud	1.472
	SRR3591711	White flower	1.638
	SRR3591712	Green floral bud	4.386
	SRR3591713	Yellow flower	0.899
SRP173429	SRR8316895	Juvenile bud stage	2.455
	SRR8316896	Juvenile bud stage	3.188
	SRR8316897	Juvenile bud stage	2.104
	SRR8316894	Third green stage	1.823
	SRR8316900	Third green stage	6.363
	SRR8316901	Third green stage	4.599
	SRR8316898	Complete white stage	0.615
	SRR8316899	Complete white stage	6.349
	SRR8316903	Complete white stage	1.628
	SRR8316902	Silver flowering stage	3.887
	SRR8316904	Silver flowering stage	4.679
	SRR8316905	Silver flowering stage	2.941
	SRR8316906	Gold flowering stage	10.120
	SRR8316907	Gold flowering stage	10.335
	SRR8316908	Gold flowering stage	4.829
SRP132670	SRR6706286	Control	1.305
	SRR6706287	Light intensity 50%	2.367
	SRR6706288	Light intensity 20%	2.301
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.854
	CNS0095593	Slightly white alabastrum(diploid) 2	6.444
	CNS0095594	Slightly white alabastrum(diploid) 3	1.903
	CNS0095595	Whole white alabastrum(diploid) 2	3.577
	CNS0095596	Whole white alabastrum(diploid) 3	2.637
	CNS0095597	Whole white alabastrum(diploid) 4	3.427
	CNS0095598	Silvery flower (diploied) 1	1.834
	CNS0095599	Silvery flower (diploied) 2	1.019
	CNS0095600	Silvery flower (diploied) 3	2.690
	CNS0095601	Golden flower (diploid) 1	1.065
	CNS0095602	Golden flower (diploid) 2	2.322
	CNS0095603	Golden flower (diploid) 3	1.625
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.480
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.593
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.264
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.348
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.271
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.679
	CNS0095610	Silvery flower (tetraploid) 1	0.780
	CNS0095611	Silvery flower (tetraploid) 2	0.993
	CNS0095612	Silvery flower (tetraploid) 3	0.568
	CNS0095613	Golden flower (tetraploid) 1	0.450
	CNS0095614	Golden flower (tetraploid) 2	0.613
	CNS0095615	Golden flower (tetraploid) 3	0.187
CRA001975	CRR073297	Stem 1	2.466
	CRR073298	Stem 2	2.249
	CRR073299	Stem 3	0.883
	CRR073300	Leaf 1	3.819
	CRR073301	Leaf 2	4.356
	CRR073302	Leaf 3	4.545
	CRR073303	Juvenile bud 1	5.329
	CRR073304	Juvenile bud 2	2.310
	CRR073305	Juvenile bud 3	5.417
	CRR073306	Third green 1	2.157
	CRR073307	Third green 2	2.226
	CRR073308	Third green 3	1.951
	CRR073309	Second white 1	3.486
	CRR073310	Second white 2	0.915
	CRR073311	Second white 3	0.728
	CRR073312	Silver flowering 1	0.265
	CRR073313	Silver flowering 2	0.536
	CRR073314	Silver flowering 3	0.030
	CRR073315	Gold flowering 1	1.461
	CRR073316	Gold flowering 2	1.199
	CRR073317	Gold flowering 3	0.549
	CRR073318	Tawny withering 1	7.297
	CRR073319	Tawny withering 2	5.335
	CRR073320	Tawny withering 3	8.589