Detail information of GWHGAAZE004886


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010090953.13.8677E-157Dehydrogenase/reductase SDR family member 4 [Morus notabilis]
Swissprottr|H9BFQ2|TPRL3_ERYCB3E-148Tropinone reductase-like 3
trEMBLtr|W9QX41|W9QX41_9ROSA1E-157Dehydrogenase/reductase SDR family member 4 {ECO:0000313|EMBL:EXB41538.1}
TAIR10AT4G05530.12E-95indole-3-butyric acid response 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene123809882123812379+
GWHAAZE00000001mRNA123809882123812379+
GWHAAZE00000001exon123809882123810013+
GWHAAZE00000001exon123810187123810303+
GWHAAZE00000001exon123811143123811277+
GWHAAZE00000001exon123811500123811625+
GWHAAZE00000001exon123812007123812108+
GWHAAZE00000001exon123812230123812379+
GWHAAZE00000001CDS123809882123810013+
GWHAAZE00000001CDS123810187123810303+
GWHAAZE00000001CDS123811143123811277+
GWHAAZE00000001CDS123811500123811625+
GWHAAZE00000001CDS123812007123812108+
GWHAAZE00000001CDS123812230123812379+
Transcript Sequence

Network for GWHGAAZE004886

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.7adh_short_C2202491.50E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11147DHRS4 Metabolic pathways map01100
Retinol metabolismmap00830
Peroxisomemap04146

Gene Ontology

GO term OntologyName
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf85.206
SRR3591706second leaf59.388
SRR3591707mature leaf61.535
SRR3591708Shoot apex88.039
SRR3591709Stem100.140
SRR3591710White floral bud114.520
SRR3591711White flower139.027
SRR3591712Green floral bud123.055
SRR3591713Yellow flower143.162
SRP173429 SRR8316895Juvenile bud stage 72.824
SRR8316896Juvenile bud stage 97.774
SRR8316897Juvenile bud stage 50.898
SRR8316894Third green stage 46.223
SRR8316900Third green stage 153.878
SRR8316901Third green stage 159.396
SRR8316898Complete white stage 74.912
SRR8316899Complete white stage 165.686
SRR8316903Complete white stage 92.134
SRR8316902Silver flowering stage79.626
SRR8316904Silver flowering stage98.346
SRR8316905Silver flowering stage45.881
SRR8316906Gold flowering stage 160.232
SRR8316907Gold flowering stage 163.656
SRR8316908Gold flowering stage 179.578
SRP132670SRR6706286Control174.775
SRR6706287Light intensity 50%166.905
SRR6706288Light intensity 20%178.811
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1115.254
CNS0095593Slightly white alabastrum(diploid) 2117.416
CNS0095594Slightly white alabastrum(diploid) 3106.601
CNS0095595Whole white alabastrum(diploid) 2125.120
CNS0095596Whole white alabastrum(diploid) 3131.960
CNS0095597Whole white alabastrum(diploid) 4106.634
CNS0095598Silvery flower (diploied) 1107.214
CNS0095599Silvery flower (diploied) 2108.340
CNS0095600Silvery flower (diploied) 3148.620
CNS0095601Golden flower (diploid) 1110.342
CNS0095602Golden flower (diploid) 2139.991
CNS0095603Golden flower (diploid) 3128.373
CNS0095604Slightly white alabastrum(tetraploid) 1122.922
CNS0095605Slightly white alabastrum(tetraploid) 2118.899
CNS0095606Slightly white alabastrum(tetraploid) 3133.792
CNS0095607Whole white alabastrum(tetraploid) 1112.300
CNS0095608Whole white alabastrum(tetraploid) 2106.786
CNS0095609Whole white alabastrum(tetraploid) 3150.283
CNS0095610Silvery flower (tetraploid) 1169.281
CNS0095611Silvery flower (tetraploid) 2141.747
CNS0095612Silvery flower (tetraploid) 3137.976
CNS0095613Golden flower (tetraploid) 1140.530
CNS0095614Golden flower (tetraploid) 2154.871
CNS0095615Golden flower (tetraploid) 3129.835
CRA001975CRR073297Stem 1130.031
CRR073298Stem 2118.968
CRR073299Stem 3133.349
CRR073300Leaf 1148.875
CRR073301Leaf 2152.226
CRR073302Leaf 3179.200
CRR073303Juvenile bud 1175.807
CRR073304Juvenile bud 2162.022
CRR073305Juvenile bud 3141.314
CRR073306Third green 1117.590
CRR073307Third green 2118.024
CRR073308Third green 3101.342
CRR073309Second white 1118.515
CRR073310Second white 2117.943
CRR073311Second white 3107.162
CRR073312Silver flowering 1103.632
CRR073313Silver flowering 295.827
CRR073314Silver flowering 3103.832
CRR073315Gold flowering 184.501
CRR073316Gold flowering 289.225
CRR073317Gold flowering 377.751
CRR073318Tawny withering 1131.230
CRR073319Tawny withering 2111.943
CRR073320Tawny withering 3123.094