Detail information of GWHGAAZE004889


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003635387.26.355E-150PREDICTED: uncharacterized protein LOC100854352 [Vitis vinifera]
trEMBLtr|F6HRV9|F6HRV9_VITVI2E-150Putative uncharacterized protein {ECO:0000313|EMBL:CCB57417.1}
TAIR10AT4G22300.12E-101carboxylesterases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene123851866123855471-
GWHAAZE00000001mRNA123851866123855471-
GWHAAZE00000001exon123851866123851955-
GWHAAZE00000001exon123852042123852149-
GWHAAZE00000001exon123852404123852525-
GWHAAZE00000001exon123852625123852748-
GWHAAZE00000001exon123853518123853570-
GWHAAZE00000001exon123855183123855471-
GWHAAZE00000001CDS123855183123855471-
GWHAAZE00000001CDS123853518123853570-
GWHAAZE00000001CDS123852625123852748-
GWHAAZE00000001CDS123852404123852525-
GWHAAZE00000001CDS123852042123852149-
GWHAAZE00000001CDS123851866123851955-
Transcript Sequence

Network for GWHGAAZE004889

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0194


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02230.17Abhydrolase_2502553.70E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06130LYPLA2 Glycerophospholipid metabolism map00564

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.958
SRR3591706second leaf24.519
SRR3591707mature leaf15.975
SRR3591708Shoot apex30.224
SRR3591709Stem39.009
SRR3591710White floral bud21.110
SRR3591711White flower27.154
SRR3591712Green floral bud21.186
SRR3591713Yellow flower23.788
SRP173429 SRR8316895Juvenile bud stage 23.279
SRR8316896Juvenile bud stage 29.590
SRR8316897Juvenile bud stage 18.684
SRR8316894Third green stage 14.076
SRR8316900Third green stage 38.664
SRR8316901Third green stage 36.427
SRR8316898Complete white stage 15.446
SRR8316899Complete white stage 54.015
SRR8316903Complete white stage 23.554
SRR8316902Silver flowering stage16.690
SRR8316904Silver flowering stage27.023
SRR8316905Silver flowering stage12.347
SRR8316906Gold flowering stage 30.807
SRR8316907Gold flowering stage 32.350
SRR8316908Gold flowering stage 31.290
SRP132670SRR6706286Control69.054
SRR6706287Light intensity 50%66.345
SRR6706288Light intensity 20%71.849
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.932
CNS0095593Slightly white alabastrum(diploid) 236.537
CNS0095594Slightly white alabastrum(diploid) 333.972
CNS0095595Whole white alabastrum(diploid) 230.790
CNS0095596Whole white alabastrum(diploid) 331.987
CNS0095597Whole white alabastrum(diploid) 432.166
CNS0095598Silvery flower (diploied) 133.826
CNS0095599Silvery flower (diploied) 232.316
CNS0095600Silvery flower (diploied) 342.788
CNS0095601Golden flower (diploid) 130.973
CNS0095602Golden flower (diploid) 234.455
CNS0095603Golden flower (diploid) 335.385
CNS0095604Slightly white alabastrum(tetraploid) 149.583
CNS0095605Slightly white alabastrum(tetraploid) 239.923
CNS0095606Slightly white alabastrum(tetraploid) 360.344
CNS0095607Whole white alabastrum(tetraploid) 129.432
CNS0095608Whole white alabastrum(tetraploid) 232.864
CNS0095609Whole white alabastrum(tetraploid) 361.345
CNS0095610Silvery flower (tetraploid) 148.737
CNS0095611Silvery flower (tetraploid) 244.987
CNS0095612Silvery flower (tetraploid) 347.650
CNS0095613Golden flower (tetraploid) 135.552
CNS0095614Golden flower (tetraploid) 243.219
CNS0095615Golden flower (tetraploid) 333.883
CRA001975CRR073297Stem 127.278
CRR073298Stem 229.958
CRR073299Stem 324.797
CRR073300Leaf 139.871
CRR073301Leaf 244.107
CRR073302Leaf 333.136
CRR073303Juvenile bud 142.012
CRR073304Juvenile bud 231.421
CRR073305Juvenile bud 339.881
CRR073306Third green 113.936
CRR073307Third green 216.885
CRR073308Third green 311.980
CRR073309Second white 119.645
CRR073310Second white 211.638
CRR073311Second white 312.721
CRR073312Silver flowering 111.160
CRR073313Silver flowering 28.793
CRR073314Silver flowering 312.853
CRR073315Gold flowering 113.627
CRR073316Gold flowering 215.724
CRR073317Gold flowering 38.855
CRR073318Tawny withering 125.089
CRR073319Tawny withering 224.032
CRR073320Tawny withering 330.600