Gene detail

Detail information of GWHGAAZE004903

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009622974.1	0	PREDICTED: putative MO25-like protein At5g47540 [Nicotiana tomentosiformis]
Swissprot	tr\|Q9FGK3\|MO25N_ARATH	0	Putative MO25-like protein At5g47540
trEMBL	tr\|A0A068U7F7\|A0A068U7F7_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_12 {ECO:0000313\|EMBL:CDP04490.1}
TAIR10	AT5G47540.1	1E-171	Mo25 family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	124119302	124124374	+
GWHAAZE00000001	mRNA	124119302	124124374	+
GWHAAZE00000001	exon	124119302	124119430	+
GWHAAZE00000001	exon	124120208	124120369	+
GWHAAZE00000001	exon	124120674	124120792	+
GWHAAZE00000001	exon	124121446	124121520	+
GWHAAZE00000001	exon	124121663	124121756	+
GWHAAZE00000001	exon	124122244	124122303	+
GWHAAZE00000001	exon	124122872	124122940	+
GWHAAZE00000001	exon	124123536	124123634	+
GWHAAZE00000001	exon	124123782	124123826	+
GWHAAZE00000001	exon	124123933	124124035	+
GWHAAZE00000001	exon	124124173	124124374	+
GWHAAZE00000001	CDS	124119302	124119430	+
GWHAAZE00000001	CDS	124120208	124120369	+
GWHAAZE00000001	CDS	124120674	124120792	+
GWHAAZE00000001	CDS	124121446	124121520	+
GWHAAZE00000001	CDS	124121663	124121756	+
GWHAAZE00000001	CDS	124122244	124122303	+
GWHAAZE00000001	CDS	124122872	124122940	+
GWHAAZE00000001	CDS	124123536	124123634	+
GWHAAZE00000001	CDS	124123782	124123826	+
GWHAAZE00000001	CDS	124123933	124124035	+
GWHAAZE00000001	CDS	124124173	124124240	+
GWHAAZE00000001	three_prime_UTR	124124241	124124374	+

Transcript Sequence
>GWHTAAZE004909 ATGAAAGGTCTCTTCAAGTCCAAACCTAAGACCCCGGTTGACCTTGTCCGTCAGACTCGAGCTCTCCTCATCTATGCCGACTCATCCGCCAATTCCTCCGACATTCCCCATAGTAAGCGTGAGGACAAGATTTCGGAGTTAGGTAAACTTATCCGGGAGCTAAAGTCAATTCTTTACGGGAACAGTGAATCTGAGCCAGTTTCGGAAGCTTGTGCACAATTGACCCAGGAATTCTTTAAAGAGAACACACTTCGTCTATTAATTATCTGCCTGCCGAAATTGAACTTAGAGGCTCGTAAAGATGCCACTCAAGTGGTCGCAAATCTGCAAAGGCAACAAGTTCAGTCTCGGCTGATTGCTTGTGATTACTTGGAAGCAAATATAGACCTTATGGACCTTTTGGTGACAGGGTATGAGAACACAGACATGGCTTTACATTATGGTGCAATGCTGAGGGAATGCATACGTCATCAGAGTGTTGCAAGGTATCTGTTGGAATCAGATCATGTGAAGAAGTTCTTTGATTATATACAACTTCCAAATTTTGACATTGCTGCTGATGCTGCTGCTACTTTCAAGGAACTCTTGACAAGGCATAAGTCAACTGTAGCTGAATTTCTTTTGAAAAATTACGACTGGTTTTTCGCAGAGTACAACTCAAAGCTGCTTGAGTCTACCAATTATATCACCAGACGACAAGCTATCAAGCTACTGGGAGATATGTTATTAGATCGTTCGAATTCTGCTGTGATGACGCGATATGTGAGTTCAAGGGATAACCTCAGGATTCTAATGAATCTGCTCAGAGAGTCAAGCAAGAGCATTCAGATAGAAGCATTTCATGTTTTTAAGTTATTTGCTGCTAATCAGAACAAGCCTGCAGACATTGTTAGCATACTCGTTGCAAATAGAAGCAAGCTTCTGCGTCTCTTTGCTGATTTCAAGACAGATAAAGAGGATGAACAGTTTGAAGCAGACAAATCCCAAGTTGTCAAGGAAATTGCTGCTCTTGAACCCAAATAACGTCCCCATGGCAGTGTTGTACGTGCAACCCCAGTTGAATTTTTTCTCCCAATTTTTGTCTGTGAATTAGTAGTGATCATAGTTGCCCCCACCTTATAACACTTGTCTTTTTCTCTTTTTCCCTTTCGAATTTC

Network for GWHGAAZE004903

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08569.12	Mo25	4	337	1.70E-125

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K08272	CAB39, MO25	AMPK signaling pathway	map04152
K08272	CAB39, MO25	mTOR signaling pathway	map04150

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	77.440
	SRR3591706	second leaf	68.038
	SRR3591707	mature leaf	121.860
	SRR3591708	Shoot apex	62.066
	SRR3591709	Stem	84.422
	SRR3591710	White floral bud	193.222
	SRR3591711	White flower	120.419
	SRR3591712	Green floral bud	100.591
	SRR3591713	Yellow flower	107.621
SRP173429	SRR8316895	Juvenile bud stage	31.328
	SRR8316896	Juvenile bud stage	49.322
	SRR8316897	Juvenile bud stage	25.556
	SRR8316894	Third green stage	25.272
	SRR8316900	Third green stage	102.567
	SRR8316901	Third green stage	92.908
	SRR8316898	Complete white stage	67.462
	SRR8316899	Complete white stage	128.733
	SRR8316903	Complete white stage	101.798
	SRR8316902	Silver flowering stage	53.655
	SRR8316904	Silver flowering stage	85.208
	SRR8316905	Silver flowering stage	36.190
	SRR8316906	Gold flowering stage	108.498
	SRR8316907	Gold flowering stage	95.447
	SRR8316908	Gold flowering stage	110.832
SRP132670	SRR6706286	Control	59.648
	SRR6706287	Light intensity 50%	63.141
	SRR6706288	Light intensity 20%	63.846
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	83.018
	CNS0095593	Slightly white alabastrum(diploid) 2	67.884
	CNS0095594	Slightly white alabastrum(diploid) 3	61.216
	CNS0095595	Whole white alabastrum(diploid) 2	83.535
	CNS0095596	Whole white alabastrum(diploid) 3	96.878
	CNS0095597	Whole white alabastrum(diploid) 4	103.841
	CNS0095598	Silvery flower (diploied) 1	69.195
	CNS0095599	Silvery flower (diploied) 2	58.443
	CNS0095600	Silvery flower (diploied) 3	87.676
	CNS0095601	Golden flower (diploid) 1	60.066
	CNS0095602	Golden flower (diploid) 2	70.462
	CNS0095603	Golden flower (diploid) 3	69.839
	CNS0095604	Slightly white alabastrum(tetraploid) 1	70.691
	CNS0095605	Slightly white alabastrum(tetraploid) 2	65.424
	CNS0095606	Slightly white alabastrum(tetraploid) 3	67.790
	CNS0095607	Whole white alabastrum(tetraploid) 1	73.943
	CNS0095608	Whole white alabastrum(tetraploid) 2	86.981
	CNS0095609	Whole white alabastrum(tetraploid) 3	96.339
	CNS0095610	Silvery flower (tetraploid) 1	88.439
	CNS0095611	Silvery flower (tetraploid) 2	84.541
	CNS0095612	Silvery flower (tetraploid) 3	89.272
	CNS0095613	Golden flower (tetraploid) 1	64.100
	CNS0095614	Golden flower (tetraploid) 2	86.171
	CNS0095615	Golden flower (tetraploid) 3	113.011
CRA001975	CRR073297	Stem 1	59.288
	CRR073298	Stem 2	58.861
	CRR073299	Stem 3	51.258
	CRR073300	Leaf 1	106.692
	CRR073301	Leaf 2	95.005
	CRR073302	Leaf 3	94.584
	CRR073303	Juvenile bud 1	107.519
	CRR073304	Juvenile bud 2	87.770
	CRR073305	Juvenile bud 3	107.748
	CRR073306	Third green 1	92.226
	CRR073307	Third green 2	97.320
	CRR073308	Third green 3	79.284
	CRR073309	Second white 1	61.063
	CRR073310	Second white 2	57.182
	CRR073311	Second white 3	51.297
	CRR073312	Silver flowering 1	66.041
	CRR073313	Silver flowering 2	66.477
	CRR073314	Silver flowering 3	49.099
	CRR073315	Gold flowering 1	55.888
	CRR073316	Gold flowering 2	63.127
	CRR073317	Gold flowering 3	48.772
	CRR073318	Tawny withering 1	59.780
	CRR073319	Tawny withering 2	53.923
	CRR073320	Tawny withering 3	64.808