Detail information of GWHGAAZE004918


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011095939.10PREDICTED: OBERON-like protein [Sesamum indicum]
Swissprottr|Q84N38|PVIP_NICBE0OBERON-like protein
trEMBLtr|A0A068U7H2|A0A068U7H2_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_12 {ECO:0000313|EMBL:CDP04505.1}
TAIR10AT5G48160.20Protein of unknown function (DUF1423)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene124385050124387719+
GWHAAZE00000001mRNA124385050124387719+
GWHAAZE00000001exon124385050124386187+
GWHAAZE00000001exon124387133124387719+
GWHAAZE00000001CDS124385050124386187+
GWHAAZE00000001CDS124387133124387719+
Transcript Sequence

Network for GWHGAAZE004918

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0046


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07227.12PHD_Oberon1913151.30E-39
PF16312.6Oberon_cc4375711.80E-50
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.957
SRR3591706second leaf3.408
SRR3591707mature leaf5.887
SRR3591708Shoot apex7.387
SRR3591709Stem10.025
SRR3591710White floral bud4.434
SRR3591711White flower7.258
SRR3591712Green floral bud3.184
SRR3591713Yellow flower5.148
SRP173429 SRR8316895Juvenile bud stage 3.964
SRR8316896Juvenile bud stage 5.219
SRR8316897Juvenile bud stage 6.140
SRR8316894Third green stage 2.295
SRR8316900Third green stage 4.804
SRR8316901Third green stage 4.535
SRR8316898Complete white stage 2.314
SRR8316899Complete white stage 7.252
SRR8316903Complete white stage 4.508
SRR8316902Silver flowering stage3.524
SRR8316904Silver flowering stage5.639
SRR8316905Silver flowering stage2.979
SRR8316906Gold flowering stage 10.378
SRR8316907Gold flowering stage 7.623
SRR8316908Gold flowering stage 19.139
SRP132670SRR6706286Control6.352
SRR6706287Light intensity 50%5.189
SRR6706288Light intensity 20%5.536
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.506
CNS0095593Slightly white alabastrum(diploid) 24.558
CNS0095594Slightly white alabastrum(diploid) 35.436
CNS0095595Whole white alabastrum(diploid) 23.394
CNS0095596Whole white alabastrum(diploid) 32.186
CNS0095597Whole white alabastrum(diploid) 43.051
CNS0095598Silvery flower (diploied) 17.452
CNS0095599Silvery flower (diploied) 29.277
CNS0095600Silvery flower (diploied) 38.086
CNS0095601Golden flower (diploid) 18.051
CNS0095602Golden flower (diploid) 211.952
CNS0095603Golden flower (diploid) 312.350
CNS0095604Slightly white alabastrum(tetraploid) 17.470
CNS0095605Slightly white alabastrum(tetraploid) 25.280
CNS0095606Slightly white alabastrum(tetraploid) 315.622
CNS0095607Whole white alabastrum(tetraploid) 16.522
CNS0095608Whole white alabastrum(tetraploid) 22.971
CNS0095609Whole white alabastrum(tetraploid) 36.521
CNS0095610Silvery flower (tetraploid) 120.009
CNS0095611Silvery flower (tetraploid) 220.070
CNS0095612Silvery flower (tetraploid) 316.936
CNS0095613Golden flower (tetraploid) 116.840
CNS0095614Golden flower (tetraploid) 223.191
CNS0095615Golden flower (tetraploid) 320.473
CRA001975CRR073297Stem 16.914
CRR073298Stem 27.033
CRR073299Stem 35.224
CRR073300Leaf 16.402
CRR073301Leaf 27.361
CRR073302Leaf 33.501
CRR073303Juvenile bud 15.343
CRR073304Juvenile bud 23.022
CRR073305Juvenile bud 36.726
CRR073306Third green 13.052
CRR073307Third green 22.801
CRR073308Third green 34.310
CRR073309Second white 14.626
CRR073310Second white 24.850
CRR073311Second white 36.196
CRR073312Silver flowering 16.003
CRR073313Silver flowering 25.901
CRR073314Silver flowering 37.831
CRR073315Gold flowering 14.990
CRR073316Gold flowering 25.254
CRR073317Gold flowering 33.915
CRR073318Tawny withering 18.521
CRR073319Tawny withering 210.136
CRR073320Tawny withering 36.604