Detail information of GWHGAAZE004926


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008227430.10PREDICTED: putative protein FAR1-RELATED SEQUENCE 10 [Prunus mume]
Swissprottr|Q9LKR4|FRS10_ARATH0Putative protein FAR1-RELATED SEQUENCE 10
trEMBLtr|M5WLZ4|M5WLZ4_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ14812.1}
TAIR10AT5G28530.10FAR1-related sequence 10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene124579613124581876-
GWHAAZE00000001mRNA124579613124581876-
GWHAAZE00000001exon124580857124581876-
GWHAAZE00000001exon124580329124580772-
GWHAAZE00000001exon124579613124580224-
GWHAAZE00000001CDS124580857124581876-
GWHAAZE00000001CDS124580329124580772-
GWHAAZE00000001CDS124579613124580224-
Transcript Sequence

Network for GWHGAAZE004926

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03101.16FAR1681598.60E-23
PF10551.10MULE2913832.50E-17
PF04434.18SWIM5705967.70E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyFAR1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.274
SRR3591706second leaf8.883
SRR3591707mature leaf15.339
SRR3591708Shoot apex12.198
SRR3591709Stem12.459
SRR3591710White floral bud6.892
SRR3591711White flower10.378
SRR3591712Green floral bud8.626
SRR3591713Yellow flower7.635
SRP173429 SRR8316895Juvenile bud stage 3.255
SRR8316896Juvenile bud stage 4.779
SRR8316897Juvenile bud stage 1.164
SRR8316894Third green stage 1.772
SRR8316900Third green stage 4.808
SRR8316901Third green stage 4.667
SRR8316898Complete white stage 2.111
SRR8316899Complete white stage 6.924
SRR8316903Complete white stage 2.343
SRR8316902Silver flowering stage1.612
SRR8316904Silver flowering stage3.433
SRR8316905Silver flowering stage1.413
SRR8316906Gold flowering stage 6.180
SRR8316907Gold flowering stage 5.538
SRR8316908Gold flowering stage 5.466
SRP132670SRR6706286Control2.026
SRR6706287Light intensity 50%2.323
SRR6706288Light intensity 20%2.192
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.844
CNS0095593Slightly white alabastrum(diploid) 23.575
CNS0095594Slightly white alabastrum(diploid) 32.311
CNS0095595Whole white alabastrum(diploid) 22.506
CNS0095596Whole white alabastrum(diploid) 32.205
CNS0095597Whole white alabastrum(diploid) 42.299
CNS0095598Silvery flower (diploied) 15.598
CNS0095599Silvery flower (diploied) 24.409
CNS0095600Silvery flower (diploied) 35.657
CNS0095601Golden flower (diploid) 15.658
CNS0095602Golden flower (diploid) 26.407
CNS0095603Golden flower (diploid) 37.893
CNS0095604Slightly white alabastrum(tetraploid) 14.416
CNS0095605Slightly white alabastrum(tetraploid) 23.685
CNS0095606Slightly white alabastrum(tetraploid) 39.843
CNS0095607Whole white alabastrum(tetraploid) 14.000
CNS0095608Whole white alabastrum(tetraploid) 22.455
CNS0095609Whole white alabastrum(tetraploid) 34.613
CNS0095610Silvery flower (tetraploid) 16.043
CNS0095611Silvery flower (tetraploid) 26.025
CNS0095612Silvery flower (tetraploid) 32.350
CNS0095613Golden flower (tetraploid) 12.649
CNS0095614Golden flower (tetraploid) 25.461
CNS0095615Golden flower (tetraploid) 35.142
CRA001975CRR073297Stem 12.463
CRR073298Stem 22.553
CRR073299Stem 32.033
CRR073300Leaf 12.437
CRR073301Leaf 21.984
CRR073302Leaf 31.153
CRR073303Juvenile bud 12.785
CRR073304Juvenile bud 21.387
CRR073305Juvenile bud 32.181
CRR073306Third green 10.370
CRR073307Third green 20.127
CRR073308Third green 30.368
CRR073309Second white 10.700
CRR073310Second white 20.782
CRR073311Second white 30.614
CRR073312Silver flowering 10.495
CRR073313Silver flowering 20.346
CRR073314Silver flowering 30.626
CRR073315Gold flowering 12.063
CRR073316Gold flowering 23.504
CRR073317Gold flowering 31.802
CRR073318Tawny withering 11.507
CRR073319Tawny withering 21.555
CRR073320Tawny withering 32.800