Detail information of GWHGAAZE004944


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010552350.10PREDICTED: heat shock protein 90-2 [Tarenaya hassleriana]
Swissprottr|P36181|HSP80_SOLLC0Heat shock cognate protein 80
trEMBLtr|F6HCU9|F6HCU9_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB50044.1}
TAIR10AT5G56000.10HEAT SHOCK PROTEIN 81.4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene124897822124900833-
GWHAAZE00000001mRNA124897822124900833-
GWHAAZE00000001exon124897822124899656-
GWHAAZE00000001exon124899741124899882-
GWHAAZE00000001exon124900708124900833-
GWHAAZE00000001CDS124900708124900833-
GWHAAZE00000001CDS124899741124899882-
GWHAAZE00000001CDS124897822124899656-
Transcript Sequence

Network for GWHGAAZE004944

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02518.27HATPase_c281823.00E-15
PF00183.19HSP901856904.10E-232
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04079HSP90A, htpG Protein processing in endoplasmic reticulum map04141
PI3K-Akt signaling pathwaymap04151
Necroptosismap04217
NOD-like receptor signaling pathwaymap04621
Antigen processing and presentationmap04612
Th17 cell differentiationmap04659
IL-17 signaling pathwaymap04657
Estrogen signaling pathwaymap04915
Progesterone-mediated oocyte maturationmap04914
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006457biological_processprotein folding
GO:0005524molecular_functionATP binding
GO:0051082molecular_functionunfolded protein binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE004944.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 301002003004005006007008009001000Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf616.665
SRR3591706second leaf258.076
SRR3591707mature leaf420.979
SRR3591708Shoot apex679.177
SRR3591709Stem528.002
SRR3591710White floral bud499.574
SRR3591711White flower549.148
SRR3591712Green floral bud796.726
SRR3591713Yellow flower329.390
SRP173429 SRR8316895Juvenile bud stage 447.602
SRR8316896Juvenile bud stage 688.853
SRR8316897Juvenile bud stage 267.098
SRR8316894Third green stage 247.180
SRR8316900Third green stage 734.122
SRR8316901Third green stage 727.387
SRR8316898Complete white stage 172.819
SRR8316899Complete white stage 864.835
SRR8316903Complete white stage 341.632
SRR8316902Silver flowering stage245.624
SRR8316904Silver flowering stage313.494
SRR8316905Silver flowering stage195.015
SRR8316906Gold flowering stage 527.312
SRR8316907Gold flowering stage 542.268
SRR8316908Gold flowering stage 483.610
SRP132670SRR6706286Control598.391
SRR6706287Light intensity 50%620.570
SRR6706288Light intensity 20%631.976
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1444.613
CNS0095593Slightly white alabastrum(diploid) 2459.991
CNS0095594Slightly white alabastrum(diploid) 3438.727
CNS0095595Whole white alabastrum(diploid) 2382.570
CNS0095596Whole white alabastrum(diploid) 3363.973
CNS0095597Whole white alabastrum(diploid) 4349.356
CNS0095598Silvery flower (diploied) 1402.345
CNS0095599Silvery flower (diploied) 2351.898
CNS0095600Silvery flower (diploied) 3636.255
CNS0095601Golden flower (diploid) 1438.883
CNS0095602Golden flower (diploid) 2662.748
CNS0095603Golden flower (diploid) 3666.814
CNS0095604Slightly white alabastrum(tetraploid) 1392.629
CNS0095605Slightly white alabastrum(tetraploid) 2309.056
CNS0095606Slightly white alabastrum(tetraploid) 3817.328
CNS0095607Whole white alabastrum(tetraploid) 1221.337
CNS0095608Whole white alabastrum(tetraploid) 2181.075
CNS0095609Whole white alabastrum(tetraploid) 3530.439
CNS0095610Silvery flower (tetraploid) 1467.171
CNS0095611Silvery flower (tetraploid) 2650.055
CNS0095612Silvery flower (tetraploid) 3478.459
CNS0095613Golden flower (tetraploid) 1359.871
CNS0095614Golden flower (tetraploid) 2471.120
CNS0095615Golden flower (tetraploid) 3411.125
CRA001975CRR073297Stem 1576.890
CRR073298Stem 2577.702
CRR073299Stem 3577.960
CRR073300Leaf 1559.324
CRR073301Leaf 2518.787
CRR073302Leaf 3493.826
CRR073303Juvenile bud 1520.600
CRR073304Juvenile bud 2391.803
CRR073305Juvenile bud 3648.709
CRR073306Third green 1365.362
CRR073307Third green 2204.729
CRR073308Third green 3276.639
CRR073309Second white 1609.583
CRR073310Second white 2353.100
CRR073311Second white 3444.194
CRR073312Silver flowering 1269.532
CRR073313Silver flowering 2247.650
CRR073314Silver flowering 3215.494
CRR073315Gold flowering 1263.779
CRR073316Gold flowering 2306.252
CRR073317Gold flowering 3358.795
CRR073318Tawny withering 1543.811
CRR073319Tawny withering 2418.697
CRR073320Tawny withering 3513.848