Detail information of GWHGAAZE005025


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009593120.14.1017E-108PREDICTED: uncharacterized protein LOC104089832 isoform X1 [Nicotiana tomentosiformis]
trEMBLtr|K4CX86|K4CX86_SOLLC7E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc10g005540.2.1}
TAIR10AT1G16445.14E-78S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene14885281491016+
GWHAAZE00000002mRNA14885281491016+
GWHAAZE00000002exon14885281488592+
GWHAAZE00000002exon14891611489353+
GWHAAZE00000002exon14901331490206+
GWHAAZE00000002exon14903801490535+
GWHAAZE00000002exon14908931491016+
GWHAAZE00000002CDS14885281488592+
GWHAAZE00000002CDS14891611489353+
GWHAAZE00000002CDS14901331490206+
GWHAAZE00000002CDS14903801490535+
GWHAAZE00000002CDS14908931491016+
Transcript Sequence

Network for GWHGAAZE005025

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0035


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06962.13rRNA_methylase611993.40E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.150
SRR3591706second leaf20.333
SRR3591707mature leaf24.430
SRR3591708Shoot apex25.337
SRR3591709Stem20.802
SRR3591710White floral bud18.234
SRR3591711White flower18.356
SRR3591712Green floral bud10.917
SRR3591713Yellow flower15.461
SRP173429 SRR8316895Juvenile bud stage 20.890
SRR8316896Juvenile bud stage 26.482
SRR8316897Juvenile bud stage 17.794
SRR8316894Third green stage 9.658
SRR8316900Third green stage 19.723
SRR8316901Third green stage 24.903
SRR8316898Complete white stage 9.695
SRR8316899Complete white stage 30.525
SRR8316903Complete white stage 17.484
SRR8316902Silver flowering stage10.403
SRR8316904Silver flowering stage13.891
SRR8316905Silver flowering stage4.078
SRR8316906Gold flowering stage 17.244
SRR8316907Gold flowering stage 14.278
SRR8316908Gold flowering stage 14.919
SRP132670SRR6706286Control10.044
SRR6706287Light intensity 50%10.418
SRR6706288Light intensity 20%10.598
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.619
CNS0095593Slightly white alabastrum(diploid) 228.796
CNS0095594Slightly white alabastrum(diploid) 329.700
CNS0095595Whole white alabastrum(diploid) 223.835
CNS0095596Whole white alabastrum(diploid) 320.369
CNS0095597Whole white alabastrum(diploid) 423.014
CNS0095598Silvery flower (diploied) 140.844
CNS0095599Silvery flower (diploied) 231.644
CNS0095600Silvery flower (diploied) 39.524
CNS0095601Golden flower (diploid) 135.679
CNS0095602Golden flower (diploid) 211.442
CNS0095603Golden flower (diploid) 311.227
CNS0095604Slightly white alabastrum(tetraploid) 127.117
CNS0095605Slightly white alabastrum(tetraploid) 227.083
CNS0095606Slightly white alabastrum(tetraploid) 325.578
CNS0095607Whole white alabastrum(tetraploid) 120.422
CNS0095608Whole white alabastrum(tetraploid) 216.926
CNS0095609Whole white alabastrum(tetraploid) 315.566
CNS0095610Silvery flower (tetraploid) 124.243
CNS0095611Silvery flower (tetraploid) 213.883
CNS0095612Silvery flower (tetraploid) 324.233
CNS0095613Golden flower (tetraploid) 122.917
CNS0095614Golden flower (tetraploid) 219.278
CNS0095615Golden flower (tetraploid) 314.256
CRA001975CRR073297Stem 119.889
CRR073298Stem 213.355
CRR073299Stem 36.441
CRR073300Leaf 115.000
CRR073301Leaf 215.106
CRR073302Leaf 35.939
CRR073303Juvenile bud 14.760
CRR073304Juvenile bud 23.679
CRR073305Juvenile bud 35.375
CRR073306Third green 11.645
CRR073307Third green 20.546
CRR073308Third green 31.873
CRR073309Second white 11.189
CRR073310Second white 23.071
CRR073311Second white 31.240
CRR073312Silver flowering 10.948
CRR073313Silver flowering 20.308
CRR073314Silver flowering 31.608
CRR073315Gold flowering 121.653
CRR073316Gold flowering 219.560
CRR073317Gold flowering 311.304
CRR073318Tawny withering 18.734
CRR073319Tawny withering 213.871
CRR073320Tawny withering 311.128