Detail information of GWHGAAZE005094


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006440558.12.34653E-89hypothetical protein CICLE_v10022601mg [Citrus clementina]
Swissprottr|Q9FUL4|RL24_PRUAV1E-8660S ribosomal protein L24
trEMBLtr|A0A067FBJ3|A0A067FBJ3_CITSI9E-90Uncharacterized protein {ECO:0000313|EMBL:KDO63540.1}
TAIR10AT3G53020.11E-49Ribosomal protein L24e family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene25949182596537+
GWHAAZE00000002mRNA25949182596537+
GWHAAZE00000002exon25949182594946+
GWHAAZE00000002exon25956292595704+
GWHAAZE00000002exon25958712595972+
GWHAAZE00000002exon25960932596241+
GWHAAZE00000002exon25963812596537+
GWHAAZE00000002CDS25949182594946+
GWHAAZE00000002CDS25956292595704+
GWHAAZE00000002CDS25958712595972+
GWHAAZE00000002CDS25960932596241+
GWHAAZE00000002CDS25963812596537+
Transcript Sequence

Network for GWHGAAZE005094

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01246.21Ribosomal_L24e11734.30E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K02896RP-L24e, RPL24 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1046.252
SRR3591706second leaf446.589
SRR3591707mature leaf223.501
SRR3591708Shoot apex1148.581
SRR3591709Stem495.652
SRR3591710White floral bud523.513
SRR3591711White flower475.926
SRR3591712Green floral bud864.523
SRR3591713Yellow flower380.892
SRP173429 SRR8316895Juvenile bud stage 498.814
SRR8316896Juvenile bud stage 659.628
SRR8316897Juvenile bud stage 408.988
SRR8316894Third green stage 306.246
SRR8316900Third green stage 1127.598
SRR8316901Third green stage 1090.371
SRR8316898Complete white stage 243.621
SRR8316899Complete white stage 881.687
SRR8316903Complete white stage 338.711
SRR8316902Silver flowering stage185.906
SRR8316904Silver flowering stage193.941
SRR8316905Silver flowering stage105.543
SRR8316906Gold flowering stage 305.225
SRR8316907Gold flowering stage 313.342
SRR8316908Gold flowering stage 414.588
SRP132670SRR6706286Control1471.640
SRR6706287Light intensity 50%1460.027
SRR6706288Light intensity 20%1522.029
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1790.789
CNS0095593Slightly white alabastrum(diploid) 21025.599
CNS0095594Slightly white alabastrum(diploid) 3795.237
CNS0095595Whole white alabastrum(diploid) 2810.024
CNS0095596Whole white alabastrum(diploid) 3857.566
CNS0095597Whole white alabastrum(diploid) 4687.353
CNS0095598Silvery flower (diploied) 1430.474
CNS0095599Silvery flower (diploied) 2484.991
CNS0095600Silvery flower (diploied) 3271.997
CNS0095601Golden flower (diploid) 1389.445
CNS0095602Golden flower (diploid) 2227.723
CNS0095603Golden flower (diploid) 3247.069
CNS0095604Slightly white alabastrum(tetraploid) 1765.602
CNS0095605Slightly white alabastrum(tetraploid) 2713.015
CNS0095606Slightly white alabastrum(tetraploid) 3924.580
CNS0095607Whole white alabastrum(tetraploid) 1444.445
CNS0095608Whole white alabastrum(tetraploid) 2424.484
CNS0095609Whole white alabastrum(tetraploid) 3769.775
CNS0095610Silvery flower (tetraploid) 1357.029
CNS0095611Silvery flower (tetraploid) 2247.615
CNS0095612Silvery flower (tetraploid) 3191.478
CNS0095613Golden flower (tetraploid) 1230.041
CNS0095614Golden flower (tetraploid) 2290.497
CNS0095615Golden flower (tetraploid) 3109.406
CRA001975CRR073297Stem 1521.252
CRR073298Stem 2558.765
CRR073299Stem 3606.087
CRR073300Leaf 1621.452
CRR073301Leaf 2696.072
CRR073302Leaf 3711.452
CRR073303Juvenile bud 1596.412
CRR073304Juvenile bud 2601.255
CRR073305Juvenile bud 3536.701
CRR073306Third green 1169.707
CRR073307Third green 2174.549
CRR073308Third green 3145.571
CRR073309Second white 1106.675
CRR073310Second white 276.197
CRR073311Second white 336.152
CRR073312Silver flowering 170.115
CRR073313Silver flowering 289.169
CRR073314Silver flowering 362.688
CRR073315Gold flowering 1173.145
CRR073316Gold flowering 2188.237
CRR073317Gold flowering 3155.729
CRR073318Tawny withering 1398.415
CRR073319Tawny withering 2378.887
CRR073320Tawny withering 3335.693