Detail information of GWHGAAZE005140


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009631118.14.8487E-121PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like isoform X1 [Nicotiana tomentosiformis]
trEMBLtr|V4TZB7|V4TZB7_9ROSI7E-116Uncharacterized protein {ECO:0000313|EMBL:ESR58967.1}
TAIR10AT3G11470.10.00034'-phosphopantetheinyl transferase superfamily

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene32195743221580-
GWHAAZE00000002mRNA32195743221580-
GWHAAZE00000002exon32214563221580-
GWHAAZE00000002exon32213043221364-
GWHAAZE00000002exon32207373220981-
GWHAAZE00000002exon32201573220328-
GWHAAZE00000002exon32195743219804-
GWHAAZE00000002CDS32214563221580-
GWHAAZE00000002CDS32213043221364-
GWHAAZE00000002CDS32207373220981-
GWHAAZE00000002CDS32201573220328-
GWHAAZE00000002CDS32195743219804-
Transcript Sequence

Network for GWHGAAZE005140

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01648.21ACPS952049.40E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06133LYS5, acpT Pantothenate and CoA biosynthesis map00770

Gene Ontology

GO term OntologyName
GO:0000287molecular_functionmagnesium ion binding
GO:0008897molecular_functionholo-[acyl-carrier-protein] synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.885
SRR3591706second leaf4.084
SRR3591707mature leaf8.846
SRR3591708Shoot apex9.054
SRR3591709Stem10.900
SRR3591710White floral bud10.791
SRR3591711White flower9.503
SRR3591712Green floral bud9.239
SRR3591713Yellow flower8.268
SRP173429 SRR8316895Juvenile bud stage 2.750
SRR8316896Juvenile bud stage 5.420
SRR8316897Juvenile bud stage 2.672
SRR8316894Third green stage 2.513
SRR8316900Third green stage 6.217
SRR8316901Third green stage 7.749
SRR8316898Complete white stage 5.893
SRR8316899Complete white stage 10.745
SRR8316903Complete white stage 6.404
SRR8316902Silver flowering stage3.345
SRR8316904Silver flowering stage5.347
SRR8316905Silver flowering stage1.699
SRR8316906Gold flowering stage 6.577
SRR8316907Gold flowering stage 4.983
SRR8316908Gold flowering stage 5.635
SRP132670SRR6706286Control2.572
SRR6706287Light intensity 50%2.333
SRR6706288Light intensity 20%3.104
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.916
CNS0095593Slightly white alabastrum(diploid) 24.016
CNS0095594Slightly white alabastrum(diploid) 34.092
CNS0095595Whole white alabastrum(diploid) 23.705
CNS0095596Whole white alabastrum(diploid) 33.304
CNS0095597Whole white alabastrum(diploid) 44.817
CNS0095598Silvery flower (diploied) 17.190
CNS0095599Silvery flower (diploied) 24.627
CNS0095600Silvery flower (diploied) 36.379
CNS0095601Golden flower (diploid) 16.661
CNS0095602Golden flower (diploid) 24.839
CNS0095603Golden flower (diploid) 35.612
CNS0095604Slightly white alabastrum(tetraploid) 17.008
CNS0095605Slightly white alabastrum(tetraploid) 25.199
CNS0095606Slightly white alabastrum(tetraploid) 312.470
CNS0095607Whole white alabastrum(tetraploid) 15.485
CNS0095608Whole white alabastrum(tetraploid) 22.838
CNS0095609Whole white alabastrum(tetraploid) 36.082
CNS0095610Silvery flower (tetraploid) 19.345
CNS0095611Silvery flower (tetraploid) 29.148
CNS0095612Silvery flower (tetraploid) 38.553
CNS0095613Golden flower (tetraploid) 16.624
CNS0095614Golden flower (tetraploid) 29.378
CNS0095615Golden flower (tetraploid) 35.821
CRA001975CRR073297Stem 13.073
CRR073298Stem 23.135
CRR073299Stem 31.427
CRR073300Leaf 13.144
CRR073301Leaf 24.152
CRR073302Leaf 31.375
CRR073303Juvenile bud 12.420
CRR073304Juvenile bud 21.495
CRR073305Juvenile bud 31.734
CRR073306Third green 10.788
CRR073307Third green 20.532
CRR073308Third green 30.298
CRR073309Second white 10.996
CRR073310Second white 20.357
CRR073311Second white 30.782
CRR073312Silver flowering 10.742
CRR073313Silver flowering 20.353
CRR073314Silver flowering 30.433
CRR073315Gold flowering 10.518
CRR073316Gold flowering 20.796
CRR073317Gold flowering 30.570
CRR073318Tawny withering 11.583
CRR073319Tawny withering 20.832
CRR073320Tawny withering 31.113