Gene detail

Detail information of GWHGAAZE005153

Functional Annotation

Database	Orthologs	Annotation
Nr	CBI25018.3	unnamed protein product [Vitis vinifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	Exocyst complex component EXO70A1
trEMBL	tr\|F6HBF9\|F6HBF9_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49568.1}
TAIR10	AT5G03540.1	exocyst subunit exo70 family protein A1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	3492952	3500432	-
GWHAAZE00000002	mRNA	3492952	3500432	-
GWHAAZE00000002	exon	3500217	3500432	-
GWHAAZE00000002	exon	3499839	3499934	-
GWHAAZE00000002	exon	3498767	3498972	-
GWHAAZE00000002	exon	3498138	3498389	-
GWHAAZE00000002	exon	3496999	3497137	-
GWHAAZE00000002	exon	3496711	3496923	-
GWHAAZE00000002	exon	3495933	3496138	-
GWHAAZE00000002	exon	3495391	3495591	-
GWHAAZE00000002	exon	3495190	3495289	-
GWHAAZE00000002	exon	3493949	3494070	-
GWHAAZE00000002	exon	3493723	3493869	-
GWHAAZE00000002	exon	3492952	3493069	-
GWHAAZE00000002	CDS	3500217	3500432	-
GWHAAZE00000002	CDS	3499839	3499934	-
GWHAAZE00000002	CDS	3498767	3498972	-
GWHAAZE00000002	CDS	3498138	3498389	-
GWHAAZE00000002	CDS	3496999	3497137	-
GWHAAZE00000002	CDS	3496711	3496923	-
GWHAAZE00000002	CDS	3495933	3496138	-
GWHAAZE00000002	CDS	3495391	3495591	-
GWHAAZE00000002	CDS	3495190	3495289	-
GWHAAZE00000002	CDS	3493949	3494070	-
GWHAAZE00000002	CDS	3493723	3493869	-
GWHAAZE00000002	CDS	3492952	3493069	-

Transcript Sequence
>GWHTAAZE005159 ATGGTATTGAGAGAGAGGAGGGTGTTGTTTCCGAGTGGAACAACACCACCAACATCTTCAACGGCGGCGGCCACTGATGATGCGTTGAGCGATAAAGCGGCGATGATGAAGCAGTCACTTGAAAATAGTCAATCCATCACTGACAACATCGTCTCCATCCTCGGCTCCTTCGACCACCGCCTCTCCGCCCTCGAAACCGCCATGCGCCCCACTCAGATTAGGACTCATTCTATACGCAAAGCTCATGAGAACATCGATAAGACCTTGAAGTCTGCAGAGGTTATATTGGCCCGGTTTGATCTTTCTCGCCAGGCTGAGGCTAAGATACTTAAAGGACCACAGGAAGACCTAGAAAGTTATCTTGAAGGAGTTGACCAGCTAAGAAGCAACATTCGATTTTTTAACAACAACAAAAGCTTTAAGAGTAGTGATGGGTTGCTAAACCATGCCAATAGCTTACTTTCTAAGGCTATTTCTAAGCTAGAAGAGGAGTTCCAGCAGCTTTTATCATCTTACAGCAAACCTGTAGAACCTGATCGACTTTTTGAGTGCCTCCCGAATTCACTGAGACCATCATCACCACTCCAGGGGGATTTCAGTGGCAAGAATCCTTCATCCCATATTCATTCTGATTGCCCAAACAGTGGCTCAGAAGATTCTGTTTACACAACACTGAATCTTATACCACCACGGATTCTTCCATTGCTGCATGACTTGGCCATACAAATGGTTCAAGCAGGTCACAAGCAGCAGTTACTGAAAATATACAGGGATACCCGTTCTTCAGTCTTGGAAGAAAGCCTTCGCATGTTGGGAGTGGAAAAACTCACTAGGGAGGATGTTCAAAGCATGCAGTGGGAGGTTTTGGAAGCCAAGATTGGGAATTGGATTCATTTCATGCGGATTGCTGTCAAACTGCTGTTTGCTGGTGAAAGGAAAGTTTGTGATCAAATATTTGAAGGCACTGGTTCCCTTCGGGATCAATGTTTTGCTGAAGTAACTGCAGCTAGTGTTGCCATGTTACTTAGTTTTGGAGACGCAATTGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTGCTCTTAGATATGTATGAGATAATGCGAGAGCTTCATTCAGAGATTGAAACGCTTTTCAAAGGTAAAGCTTGCACCGAAATTAGAGAGTCTGCATTGGGTTTAACAAAGCGACTTGCCCAGACTGCCCAAGATACTTTCAGTGATTTTGAAGAAGCAGTTGAAAAGGATGCAACAAGAACTGCTGTGTCAGATGGAACCGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTCTATTTGACTATCAGTCAACTTTGAAGCAGCTCTTCCAAGAGTTTGAAAATCCAGGTGAATCAAATTCTCAGCTGGCATCCGTAACAATGCGAATAATGCAGGCTCTCCAGATCAATTTGGAGGCAAAATCCAAGCAATATAAAGATGTTGCTCTCACTCACTTGTTTCTTATGAACAACATTCACTATATGGTTAGATCGGTGCGCAGGTCTGAAGCTAAGGATTTGTTAGGGGACGATTGGGTGCAAAGACACCGAAGAGTTGTTCAGCAACATGCAAACCAGTACAAGAGGATTGCTTGGGCAAAGATCCTGCAGTGCCTCTCTGTTCAAGGCCTGACATCATCTGGGGGTGGTAGTTCTAGTTCAGTTGGTGTTGACGGAGGAAGTAGTAGTAGTAGTGGAGTATCAAGAGCAGTCATAAAAGAGAGGTTGAAGACTTTCAATGCGCAGTTTGAGGAGCTTCATCAAAGACAATCTGAGTGGACAGTTCCTGATACGGAGTTGCGAGAATCTCTGAGGCTTGCTGTTGCTGAAGTCTTATTGCCAGCATACAGATCTTTCATTAAACGTTTTGGTCCACTGGTTGAGAATGGAAAGAATGCCCACAAGTACATCAGATACACGGCAGAAGATCTTGATAGAATGCTCGGTGAATTTTTCGAGGGTAAGACTTTAAATGAGCCCAGGCGGTAG

Network for GWHGAAZE005153

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	295	658	3.40E-126

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	24.769
	SRR3591706	second leaf	5.270
	SRR3591707	mature leaf	20.547
	SRR3591708	Shoot apex	9.227
	SRR3591709	Stem	31.449
	SRR3591710	White floral bud	19.619
	SRR3591711	White flower	21.673
	SRR3591712	Green floral bud	12.510
	SRR3591713	Yellow flower	19.561
SRP173429	SRR8316895	Juvenile bud stage	9.051
	SRR8316896	Juvenile bud stage	11.270
	SRR8316897	Juvenile bud stage	6.931
	SRR8316894	Third green stage	4.634
	SRR8316900	Third green stage	15.092
	SRR8316901	Third green stage	17.099
	SRR8316898	Complete white stage	10.801
	SRR8316899	Complete white stage	27.794
	SRR8316903	Complete white stage	16.098
	SRR8316902	Silver flowering stage	9.537
	SRR8316904	Silver flowering stage	13.501
	SRR8316905	Silver flowering stage	5.992
	SRR8316906	Gold flowering stage	19.852
	SRR8316907	Gold flowering stage	15.860
	SRR8316908	Gold flowering stage	15.793
SRP132670	SRR6706286	Control	11.962
	SRR6706287	Light intensity 50%	14.565
	SRR6706288	Light intensity 20%	16.529
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	11.884
	CNS0095593	Slightly white alabastrum(diploid) 2	12.251
	CNS0095594	Slightly white alabastrum(diploid) 3	12.386
	CNS0095595	Whole white alabastrum(diploid) 2	11.023
	CNS0095596	Whole white alabastrum(diploid) 3	10.629
	CNS0095597	Whole white alabastrum(diploid) 4	13.411
	CNS0095598	Silvery flower (diploied) 1	16.213
	CNS0095599	Silvery flower (diploied) 2	15.177
	CNS0095600	Silvery flower (diploied) 3	19.464
	CNS0095601	Golden flower (diploid) 1	18.122
	CNS0095602	Golden flower (diploid) 2	20.918
	CNS0095603	Golden flower (diploid) 3	19.807
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.018
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.494
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.657
	CNS0095607	Whole white alabastrum(tetraploid) 1	11.892
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.414
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.591
	CNS0095610	Silvery flower (tetraploid) 1	21.223
	CNS0095611	Silvery flower (tetraploid) 2	18.250
	CNS0095612	Silvery flower (tetraploid) 3	14.677
	CNS0095613	Golden flower (tetraploid) 1	9.635
	CNS0095614	Golden flower (tetraploid) 2	16.849
	CNS0095615	Golden flower (tetraploid) 3	14.431
CRA001975	CRR073297	Stem 1	17.412
	CRR073298	Stem 2	15.152
	CRR073299	Stem 3	10.092
	CRR073300	Leaf 1	18.101
	CRR073301	Leaf 2	16.357
	CRR073302	Leaf 3	12.988
	CRR073303	Juvenile bud 1	13.588
	CRR073304	Juvenile bud 2	11.994
	CRR073305	Juvenile bud 3	18.518
	CRR073306	Third green 1	9.797
	CRR073307	Third green 2	9.291
	CRR073308	Third green 3	10.887
	CRR073309	Second white 1	5.352
	CRR073310	Second white 2	7.226
	CRR073311	Second white 3	6.734
	CRR073312	Silver flowering 1	4.204
	CRR073313	Silver flowering 2	2.878
	CRR073314	Silver flowering 3	3.543
	CRR073315	Gold flowering 1	12.397
	CRR073316	Gold flowering 2	20.092
	CRR073317	Gold flowering 3	6.942
	CRR073318	Tawny withering 1	17.103
	CRR073319	Tawny withering 2	14.109
	CRR073320	Tawny withering 3	17.666