Detail information of GWHGAAZE005229


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002270291.20PREDICTED: uncharacterized protein LOC100266835 isoform X2 [Vitis vinifera]
trEMBLtr|V4TLM7|V4TLM7_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR50696.1}
TAIR10AT5G32470.10Haem oxygenase-like, multi-helical

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene46092514616382-
GWHAAZE00000002mRNA46092514616382-
GWHAAZE00000002exon46092514609663-
GWHAAZE00000002exon46116334611899-
GWHAAZE00000002exon46119904612404-
GWHAAZE00000002exon46125224612812-
GWHAAZE00000002exon46158004615908-
GWHAAZE00000002exon46160394616382-
GWHAAZE00000002CDS46160394616382-
GWHAAZE00000002CDS46158004615908-
GWHAAZE00000002CDS46125224612812-
GWHAAZE00000002CDS46119904612404-
GWHAAZE00000002CDS46116334611899-
GWHAAZE00000002CDS46092514609663-
Transcript Sequence

Network for GWHGAAZE005229

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03070.17TENA_THI-4831801.50E-07
PF03070.17TENA_THI-42042886.30E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22911TH2 Metabolic pathways map01100
Thiamine metabolismmap00730

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.593
SRR3591706second leaf10.751
SRR3591707mature leaf12.545
SRR3591708Shoot apex15.884
SRR3591709Stem22.237
SRR3591710White floral bud22.658
SRR3591711White flower24.495
SRR3591712Green floral bud19.280
SRR3591713Yellow flower19.428
SRP173429 SRR8316895Juvenile bud stage 10.421
SRR8316896Juvenile bud stage 14.062
SRR8316897Juvenile bud stage 5.961
SRR8316894Third green stage 7.092
SRR8316900Third green stage 23.259
SRR8316901Third green stage 20.944
SRR8316898Complete white stage 13.719
SRR8316899Complete white stage 26.472
SRR8316903Complete white stage 21.989
SRR8316902Silver flowering stage13.637
SRR8316904Silver flowering stage17.262
SRR8316905Silver flowering stage8.189
SRR8316906Gold flowering stage 21.210
SRR8316907Gold flowering stage 18.621
SRR8316908Gold flowering stage 23.773
SRP132670SRR6706286Control15.749
SRR6706287Light intensity 50%18.295
SRR6706288Light intensity 20%17.619
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.454
CNS0095593Slightly white alabastrum(diploid) 29.734
CNS0095594Slightly white alabastrum(diploid) 39.133
CNS0095595Whole white alabastrum(diploid) 29.374
CNS0095596Whole white alabastrum(diploid) 310.038
CNS0095597Whole white alabastrum(diploid) 410.404
CNS0095598Silvery flower (diploied) 110.191
CNS0095599Silvery flower (diploied) 27.552
CNS0095600Silvery flower (diploied) 321.196
CNS0095601Golden flower (diploid) 17.352
CNS0095602Golden flower (diploid) 217.595
CNS0095603Golden flower (diploid) 318.112
CNS0095604Slightly white alabastrum(tetraploid) 112.397
CNS0095605Slightly white alabastrum(tetraploid) 210.093
CNS0095606Slightly white alabastrum(tetraploid) 317.447
CNS0095607Whole white alabastrum(tetraploid) 18.487
CNS0095608Whole white alabastrum(tetraploid) 29.281
CNS0095609Whole white alabastrum(tetraploid) 316.779
CNS0095610Silvery flower (tetraploid) 120.004
CNS0095611Silvery flower (tetraploid) 218.115
CNS0095612Silvery flower (tetraploid) 317.265
CNS0095613Golden flower (tetraploid) 19.727
CNS0095614Golden flower (tetraploid) 218.497
CNS0095615Golden flower (tetraploid) 319.527
CRA001975CRR073297Stem 113.056
CRR073298Stem 210.860
CRR073299Stem 39.021
CRR073300Leaf 113.802
CRR073301Leaf 211.052
CRR073302Leaf 310.485
CRR073303Juvenile bud 111.551
CRR073304Juvenile bud 29.274
CRR073305Juvenile bud 313.926
CRR073306Third green 18.665
CRR073307Third green 28.925
CRR073308Third green 38.391
CRR073309Second white 15.746
CRR073310Second white 26.609
CRR073311Second white 36.598
CRR073312Silver flowering 15.333
CRR073313Silver flowering 25.718
CRR073314Silver flowering 32.274
CRR073315Gold flowering 12.737
CRR073316Gold flowering 25.854
CRR073317Gold flowering 32.576
CRR073318Tawny withering 19.948
CRR073319Tawny withering 26.674
CRR073320Tawny withering 310.120