Detail information of GWHGAAZE005243


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACU15164.19.80003E-61unknown [Glycine max]
Swissprottr|Q9SVU5|GDL67_ARATH3E-55GDSL esterase/lipase At4g28780 (Precursor)
trEMBLtr|C6T0W9|C6T0W9_SOYBN4E-61Putative uncharacterized protein {ECO:0000313|EMBL:ACU15164.1} (Fragment)
TAIR10AT4G28780.14E-46GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene47882984788969+
GWHAAZE00000002mRNA47882984788969+
GWHAAZE00000002exon47882984788514+
GWHAAZE00000002exon47888334788969+
GWHAAZE00000002CDS47882984788514+
GWHAAZE00000002CDS47888334788969+
Transcript Sequence

Network for GWHGAAZE005243

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0196


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00657.23Lipase_GDSL23989.50E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.019
SRR3591706second leaf2.635
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.637
SRR3591709Stem0.000
SRR3591710White floral bud0.491
SRR3591711White flower0.000
SRR3591712Green floral bud9.350
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 5.978
SRR8316896Juvenile bud stage 11.353
SRR8316897Juvenile bud stage 1.448
SRR8316894Third green stage 5.628
SRR8316900Third green stage 0.145
SRR8316901Third green stage 0.629
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control2.321
SRR6706287Light intensity 50%0.667
SRR6706288Light intensity 20%0.276
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.822
CNS0095593Slightly white alabastrum(diploid) 21.465
CNS0095594Slightly white alabastrum(diploid) 30.850
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.398
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 17.370
CNS0095605Slightly white alabastrum(tetraploid) 21.056
CNS0095606Slightly white alabastrum(tetraploid) 355.680
CNS0095607Whole white alabastrum(tetraploid) 10.201
CNS0095608Whole white alabastrum(tetraploid) 20.096
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 17.526
CRR073298Stem 211.467
CRR073299Stem 38.873
CRR073300Leaf 11.145
CRR073301Leaf 22.084
CRR073302Leaf 30.243
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.149
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000