Detail information of GWHGAAZE005251


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011097806.13.36859E-67PREDICTED: protein PIR [Sesamum indicum]
Swissprottr|Q5S2C3|PIR_ARATH3E-61Protein PIR
trEMBLtr|F6HI28|F6HI28_VITVI5E-66Putative uncharacterized protein {ECO:0000313|EMBL:CCB51875.1}
TAIR10AT5G18410.37E-54transcription activators

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene49546324955831+
GWHAAZE00000002mRNA49546324955831+
GWHAAZE00000002exon49546324954823+
GWHAAZE00000002exon49555424955618+
GWHAAZE00000002exon49556934955831+
GWHAAZE00000002CDS49546324954823+
GWHAAZE00000002CDS49555424955618+
GWHAAZE00000002CDS49556934955831+
Transcript Sequence

Network for GWHGAAZE005251

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05994.12FragX_IP61246.90E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05749CYFIP RNA transport map03013
Regulation of actin cytoskeletonmap04810

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.251
SRR3591706second leaf14.754
SRR3591707mature leaf9.062
SRR3591708Shoot apex16.657
SRR3591709Stem20.811
SRR3591710White floral bud13.270
SRR3591711White flower12.986
SRR3591712Green floral bud22.164
SRR3591713Yellow flower8.143
SRP173429 SRR8316895Juvenile bud stage 11.083
SRR8316896Juvenile bud stage 16.757
SRR8316897Juvenile bud stage 6.534
SRR8316894Third green stage 7.335
SRR8316900Third green stage 23.198
SRR8316901Third green stage 17.796
SRR8316898Complete white stage 4.971
SRR8316899Complete white stage 15.616
SRR8316903Complete white stage 8.419
SRR8316902Silver flowering stage3.802
SRR8316904Silver flowering stage6.162
SRR8316905Silver flowering stage1.945
SRR8316906Gold flowering stage 8.430
SRR8316907Gold flowering stage 7.908
SRR8316908Gold flowering stage 6.203
SRP132670SRR6706286Control0.707
SRR6706287Light intensity 50%0.957
SRR6706288Light intensity 20%1.633
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.838
CNS0095593Slightly white alabastrum(diploid) 28.076
CNS0095594Slightly white alabastrum(diploid) 310.001
CNS0095595Whole white alabastrum(diploid) 25.472
CNS0095596Whole white alabastrum(diploid) 36.232
CNS0095597Whole white alabastrum(diploid) 45.818
CNS0095598Silvery flower (diploied) 18.399
CNS0095599Silvery flower (diploied) 24.492
CNS0095600Silvery flower (diploied) 312.158
CNS0095601Golden flower (diploid) 15.318
CNS0095602Golden flower (diploid) 214.670
CNS0095603Golden flower (diploid) 314.714
CNS0095604Slightly white alabastrum(tetraploid) 111.536
CNS0095605Slightly white alabastrum(tetraploid) 25.693
CNS0095606Slightly white alabastrum(tetraploid) 320.266
CNS0095607Whole white alabastrum(tetraploid) 17.629
CNS0095608Whole white alabastrum(tetraploid) 28.190
CNS0095609Whole white alabastrum(tetraploid) 323.946
CNS0095610Silvery flower (tetraploid) 111.892
CNS0095611Silvery flower (tetraploid) 214.930
CNS0095612Silvery flower (tetraploid) 312.817
CNS0095613Golden flower (tetraploid) 12.294
CNS0095614Golden flower (tetraploid) 210.681
CNS0095615Golden flower (tetraploid) 310.352
CRA001975CRR073297Stem 12.528
CRR073298Stem 25.459
CRR073299Stem 32.309
CRR073300Leaf 15.057
CRR073301Leaf 24.837
CRR073302Leaf 32.047
CRR073303Juvenile bud 12.886
CRR073304Juvenile bud 22.313
CRR073305Juvenile bud 35.999
CRR073306Third green 11.320
CRR073307Third green 20.196
CRR073308Third green 31.933
CRR073309Second white 11.563
CRR073310Second white 21.644
CRR073311Second white 34.096
CRR073312Silver flowering 12.652
CRR073313Silver flowering 22.193
CRR073314Silver flowering 31.464
CRR073315Gold flowering 11.915
CRR073316Gold flowering 22.463
CRR073317Gold flowering 32.179
CRR073318Tawny withering 14.014
CRR073319Tawny withering 23.428
CRR073320Tawny withering 36.751