Detail information of GWHGAAZE005297


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010244569.12.1669E-136PREDICTED: V-type proton ATPase subunit E-like [Nelumbo nucifera]
Swissprottr|Q9MB46|VATE_CITUN6E-128V-type proton ATPase subunit E
trEMBLtr|F6HMT9|F6HMT9_VITVI3E-133Putative uncharacterized protein {ECO:0000313|EMBL:CCB55964.1}
TAIR10AT4G11150.13E-95vacuolar ATP synthase subunit E1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene56878825692202-
GWHAAZE00000002mRNA56878825692202-
GWHAAZE00000002exon56921015692202-
GWHAAZE00000002exon56909555691055-
GWHAAZE00000002exon56897845689940-
GWHAAZE00000002exon56892595689455-
GWHAAZE00000002exon56887175688816-
GWHAAZE00000002exon56878825687917-
GWHAAZE00000002CDS56921015692202-
GWHAAZE00000002CDS56909555691055-
GWHAAZE00000002CDS56897845689940-
GWHAAZE00000002CDS56892595689455-
GWHAAZE00000002CDS56887175688816-
GWHAAZE00000002CDS56878825687917-
Transcript Sequence

Network for GWHGAAZE005297

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01991.19vATP-synt_E162254.60E-74
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02150ATPeV1E, ATP6E Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600biological_processproton transmembrane transport
GO:0033178cellular_componentproton-transporting two-sector ATPase complex, catalytic domain
GO:0046961molecular_functionproton-transporting ATPase activity, rotational mechanism

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf290.301
SRR3591706second leaf157.101
SRR3591707mature leaf112.094
SRR3591708Shoot apex169.666
SRR3591709Stem219.066
SRR3591710White floral bud325.123
SRR3591711White flower310.292
SRR3591712Green floral bud390.308
SRR3591713Yellow flower306.542
SRP173429 SRR8316895Juvenile bud stage 119.421
SRR8316896Juvenile bud stage 189.201
SRR8316897Juvenile bud stage 109.512
SRR8316894Third green stage 91.766
SRR8316900Third green stage 309.849
SRR8316901Third green stage 295.094
SRR8316898Complete white stage 113.426
SRR8316899Complete white stage 255.843
SRR8316903Complete white stage 187.123
SRR8316902Silver flowering stage145.034
SRR8316904Silver flowering stage200.328
SRR8316905Silver flowering stage99.159
SRR8316906Gold flowering stage 279.120
SRR8316907Gold flowering stage 290.112
SRR8316908Gold flowering stage 297.913
SRP132670SRR6706286Control188.421
SRR6706287Light intensity 50%210.785
SRR6706288Light intensity 20%225.382
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1176.304
CNS0095593Slightly white alabastrum(diploid) 2182.491
CNS0095594Slightly white alabastrum(diploid) 3173.824
CNS0095595Whole white alabastrum(diploid) 2195.034
CNS0095596Whole white alabastrum(diploid) 3225.838
CNS0095597Whole white alabastrum(diploid) 4179.292
CNS0095598Silvery flower (diploied) 1109.087
CNS0095599Silvery flower (diploied) 2113.553
CNS0095600Silvery flower (diploied) 3186.626
CNS0095601Golden flower (diploid) 1112.432
CNS0095602Golden flower (diploid) 2148.898
CNS0095603Golden flower (diploid) 3152.645
CNS0095604Slightly white alabastrum(tetraploid) 1244.749
CNS0095605Slightly white alabastrum(tetraploid) 2220.416
CNS0095606Slightly white alabastrum(tetraploid) 3206.468
CNS0095607Whole white alabastrum(tetraploid) 1226.473
CNS0095608Whole white alabastrum(tetraploid) 2262.352
CNS0095609Whole white alabastrum(tetraploid) 3291.354
CNS0095610Silvery flower (tetraploid) 1190.971
CNS0095611Silvery flower (tetraploid) 2174.905
CNS0095612Silvery flower (tetraploid) 3201.144
CNS0095613Golden flower (tetraploid) 1131.229
CNS0095614Golden flower (tetraploid) 2152.752
CNS0095615Golden flower (tetraploid) 3173.468
CRA001975CRR073297Stem 1173.796
CRR073298Stem 2181.782
CRR073299Stem 3191.268
CRR073300Leaf 1237.142
CRR073301Leaf 2196.460
CRR073302Leaf 3270.105
CRR073303Juvenile bud 1271.586
CRR073304Juvenile bud 2269.783
CRR073305Juvenile bud 3196.887
CRR073306Third green 1242.062
CRR073307Third green 2261.228
CRR073308Third green 3229.588
CRR073309Second white 1286.193
CRR073310Second white 2243.329
CRR073311Second white 3225.970
CRR073312Silver flowering 1240.277
CRR073313Silver flowering 2247.958
CRR073314Silver flowering 3239.025
CRR073315Gold flowering 1102.082
CRR073316Gold flowering 2107.799
CRR073317Gold flowering 398.256
CRR073318Tawny withering 1143.609
CRR073319Tawny withering 2140.564
CRR073320Tawny withering 3157.654