Detail information of GWHGAAZE005351


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007026536.11.143E-147NAD(P)-binding Rossmann-fold superfamily protein [Theobroma cacao]
Swissprottr|Q9SCU0|SDR2A_ARATH3E-119Short-chain dehydrogenase reductase 2a
trEMBLtr|A0A061EQT3|A0A061EQT3_THECC4E-148NAD(P)-binding Rossmann-fold superfamily protein {ECO:0000313|EMBL:EOY07038.1}
TAIR10AT3G51680.14E-93NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene65100816511170-
GWHAAZE00000002mRNA65100816511170-
GWHAAZE00000002exon65100816510476-
GWHAAZE00000002exon65105606510896-
GWHAAZE00000002exon65110826511170-
GWHAAZE00000002CDS65110826511170-
GWHAAZE00000002CDS65105606510896-
GWHAAZE00000002CDS65100816510476-
Transcript Sequence

Network for GWHGAAZE005351

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0121


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.7adh_short_C2401432.90E-23
PF13561.7adh_short_C21502657.40E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.906
SRR3591706second leaf4.791
SRR3591707mature leaf1.104
SRR3591708Shoot apex6.865
SRR3591709Stem1.779
SRR3591710White floral bud9.427
SRR3591711White flower13.760
SRR3591712Green floral bud38.149
SRR3591713Yellow flower5.599
SRP173429 SRR8316895Juvenile bud stage 46.658
SRR8316896Juvenile bud stage 94.526
SRR8316897Juvenile bud stage 31.904
SRR8316894Third green stage 19.346
SRR8316900Third green stage 48.393
SRR8316901Third green stage 53.891
SRR8316898Complete white stage 3.670
SRR8316899Complete white stage 20.766
SRR8316903Complete white stage 2.271
SRR8316902Silver flowering stage1.839
SRR8316904Silver flowering stage1.900
SRR8316905Silver flowering stage1.668
SRR8316906Gold flowering stage 12.794
SRR8316907Gold flowering stage 5.010
SRR8316908Gold flowering stage 10.830
SRP132670SRR6706286Control35.765
SRR6706287Light intensity 50%49.102
SRR6706288Light intensity 20%61.513
CNP0000432CNS0095592Slightly white alabastrum(diploid) 133.127
CNS0095593Slightly white alabastrum(diploid) 219.862
CNS0095594Slightly white alabastrum(diploid) 354.740
CNS0095595Whole white alabastrum(diploid) 219.958
CNS0095596Whole white alabastrum(diploid) 330.914
CNS0095597Whole white alabastrum(diploid) 418.971
CNS0095598Silvery flower (diploied) 112.693
CNS0095599Silvery flower (diploied) 24.574
CNS0095600Silvery flower (diploied) 36.398
CNS0095601Golden flower (diploid) 19.851
CNS0095602Golden flower (diploid) 29.609
CNS0095603Golden flower (diploid) 39.533
CNS0095604Slightly white alabastrum(tetraploid) 131.060
CNS0095605Slightly white alabastrum(tetraploid) 223.681
CNS0095606Slightly white alabastrum(tetraploid) 347.299
CNS0095607Whole white alabastrum(tetraploid) 19.377
CNS0095608Whole white alabastrum(tetraploid) 223.097
CNS0095609Whole white alabastrum(tetraploid) 373.471
CNS0095610Silvery flower (tetraploid) 123.204
CNS0095611Silvery flower (tetraploid) 215.524
CNS0095612Silvery flower (tetraploid) 31.093
CNS0095613Golden flower (tetraploid) 112.402
CNS0095614Golden flower (tetraploid) 215.714
CNS0095615Golden flower (tetraploid) 32.674
CRA001975CRR073297Stem 173.683
CRR073298Stem 279.480
CRR073299Stem 397.957
CRR073300Leaf 118.319
CRR073301Leaf 221.112
CRR073302Leaf 328.383
CRR073303Juvenile bud 111.079
CRR073304Juvenile bud 28.449
CRR073305Juvenile bud 315.523
CRR073306Third green 10.605
CRR073307Third green 21.347
CRR073308Third green 30.221
CRR073309Second white 11.596
CRR073310Second white 21.261
CRR073311Second white 31.379
CRR073312Silver flowering 15.477
CRR073313Silver flowering 26.509
CRR073314Silver flowering 32.406
CRR073315Gold flowering 12.362
CRR073316Gold flowering 21.303
CRR073317Gold flowering 31.754
CRR073318Tawny withering 18.671
CRR073319Tawny withering 213.624
CRR073320Tawny withering 35.953