Gene detail

Detail information of GWHGAAZE005397

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007026664.1	0	SAC domain-containing protein 8 isoform 2 [Theobroma cacao]
Swissprot	tr\|Q96328\|SAC8_ARATH	0	Phosphoinositide phosphatase SAC8
trEMBL	tr\|A5BMH3\|A5BMH3_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN61566.1}
TAIR10	AT3G51830.1	3E-174	SAC domain-containing protein 8

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	7276277	7290270	+
GWHAAZE00000002	mRNA	7276277	7290270	+
GWHAAZE00000002	exon	7276277	7276427	+
GWHAAZE00000002	exon	7278191	7278265	+
GWHAAZE00000002	exon	7279314	7279441	+
GWHAAZE00000002	exon	7279544	7279635	+
GWHAAZE00000002	exon	7279784	7279841	+
GWHAAZE00000002	exon	7281105	7281161	+
GWHAAZE00000002	exon	7281693	7281830	+
GWHAAZE00000002	exon	7283840	7283926	+
GWHAAZE00000002	exon	7284026	7284103	+
GWHAAZE00000002	exon	7284215	7284274	+
GWHAAZE00000002	exon	7286052	7286159	+
GWHAAZE00000002	exon	7286304	7286412	+
GWHAAZE00000002	exon	7286545	7286617	+
GWHAAZE00000002	exon	7289244	7289335	+
GWHAAZE00000002	exon	7289851	7290270	+
GWHAAZE00000002	CDS	7276277	7276427	+
GWHAAZE00000002	CDS	7278191	7278265	+
GWHAAZE00000002	CDS	7279314	7279441	+
GWHAAZE00000002	CDS	7279544	7279635	+
GWHAAZE00000002	CDS	7279784	7279841	+
GWHAAZE00000002	CDS	7281105	7281161	+
GWHAAZE00000002	CDS	7281693	7281830	+
GWHAAZE00000002	CDS	7283840	7283926	+
GWHAAZE00000002	CDS	7284026	7284103	+
GWHAAZE00000002	CDS	7284215	7284274	+
GWHAAZE00000002	CDS	7286052	7286159	+
GWHAAZE00000002	CDS	7286304	7286412	+
GWHAAZE00000002	CDS	7286545	7286617	+
GWHAAZE00000002	CDS	7289244	7289335	+
GWHAAZE00000002	CDS	7289851	7289978	+
GWHAAZE00000002	three_prime_UTR	7289979	7290270	+

Transcript Sequence
>GWHTAAZE005403 ATGGAGATTCGATCAGTTTCTAATCACTTCAAGTTGTGGAGCGAACTGGGGCTACATGAATTTCAAGACAGGTTCTTGATCAGATCCATCCAATCGCCCGATCAAGGCTTCTCTATTGATCGTTCCGATGGCATCATCGAGGAGCTTAGCGGTATTACTTGTCCCGGTAATCCTTACAAAATCTCTACAATATATGGGGTGGCTGGGACCATTAGGTTGCTTGCAGGAACACATGTACTGGTGATAACATCTAGGAAGGAAGTTGGCACTTATCTTGGTTTCCCTGTTTTTCGGGTGATGTCTATGAAGTTCTTATCTTGCAACAAGGCTGCAAGATTTCTAACGAATCAAGAAAAACGAGATGAAGCTTATTTCATGAATCTACTGAAAATAGTGGAATCAACTCCTGGGTTGTATTATTCATATGAAACTGATATAACATTGAACTTGCAGAGAAGATTCAAGTTGGCTGAAGGTTGGATGAGTAAACCAATGTGGAAGCAGGGTGACCCAAGATTTGTTTGGAACAGAAATATTTTGGAGGAGCTTATTGAGAATAAGATGCTGTATCTAACTGTTTTGAAGAAATTAGGTACAAGAATGTGGAGAAGGGGAGCCAACCTAGAAGGAGATACTGCTAATTTTATTGAAACTGAACAATTGCTCGAGTTTGAAGGTTTTATGTCCTCACTTTTGCAGATTCGAGGTTCAATTCCACTTCTATGGGAACAAATTGTTGATTTGAGCTATAAACCACGACTTAATATCATTCACCATGAGCAAACACCAAAGGTTGTAGAGCGTCATTTTCATGATCTTTTCCAAAGATATGGGGAGACGGTTGCAGTTGACCTAACTGATAAGCTTGGTGATGAGGGTATGCTAAATATGGCGTATGCTGCTGAAATGCAAAAGCTGCCCAATCTGAGCAGATATTTCCTTCTAGACCCAGAGGGGCAGATAATAGCAGAGCAGAAAGGGATTATTAGATCTAACTGCATTGACTGTCTTGATCGAACAAATGTTACACAGAGTTACCTTGCTCGGAAATCTTTGAATTCGCAACTGCAGCGAGTTGGTGCACTTTCTTCCGATGAGTGCATTTCTAACTTTGGTGAAGATTTTGAAATTTTCAAGACTTTGTGGGTGGAGCAAGGTGATGAGATTAGCGTTGAATATGCTGGAACCCATGCACTGAAACGAGACCTTGTTAGACATGGATCAACTGGAAAATTGCAGTATCTGCCAGTAGCATCAGCATTGTTGATTGGAGGATTGACGGTAACATCCATCACACTTAACCAAGCGGGGCGAAATGCACAAAGTTTCTTGTCTACTGCACTGTGTGCTGGTGCAACTGCTGGAATGATGGCGCTGGCCAAATCCAATGGAAGGCAGTTTTGTTCCAGGCCTCGCTTGTGCGGCCTTTTTTAAATTGTAAAATTGGGATTTTATATTCCTATAAAAGTGTACATTAACTTCAAAGTTGGTCCATAAATCTGTAATAAAATATGAAAAACAACAGTCATTATCTCCCGCAATTCAATTAGACGTAGCGTATTGTTCTAGGTTGAAGCAATTGGATAAGCATGGCGTTCTCATGTAGGCCAGTGACCGCACAAGCTTCAACCTTCTTGTACTTACGATATCTATGCATGTTAATAACTATTTCCTACTTGCGAACTTGATATTTTCCTCCCAAACTAGGAGTTGTTTCAACTATCAA

Network for GWHGAAZE005397

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02383.19	Syja_N	65	187	1.90E-24
PF02383.19	Syja_N	196	308	2.20E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K21797	SAC1, SACM1L	Metabolic pathways	map01100
		Inositol phosphate metabolism	map00562
		Phosphatidylinositol signaling system	map04070

Gene Ontology

GO term	Ontology	Name
GO:0042578	molecular_function	phosphoric ester hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	73.304
	SRR3591706	second leaf	12.592
	SRR3591707	mature leaf	16.062
	SRR3591708	Shoot apex	24.421
	SRR3591709	Stem	73.210
	SRR3591710	White floral bud	29.240
	SRR3591711	White flower	46.661
	SRR3591712	Green floral bud	13.886
	SRR3591713	Yellow flower	66.595
SRP173429	SRR8316895	Juvenile bud stage	9.862
	SRR8316896	Juvenile bud stage	13.805
	SRR8316897	Juvenile bud stage	7.775
	SRR8316894	Third green stage	7.127
	SRR8316900	Third green stage	13.356
	SRR8316901	Third green stage	13.901
	SRR8316898	Complete white stage	12.551
	SRR8316899	Complete white stage	25.133
	SRR8316903	Complete white stage	22.346
	SRR8316902	Silver flowering stage	19.180
	SRR8316904	Silver flowering stage	25.032
	SRR8316905	Silver flowering stage	13.294
	SRR8316906	Gold flowering stage	52.926
	SRR8316907	Gold flowering stage	44.348
	SRR8316908	Gold flowering stage	52.197
SRP132670	SRR6706286	Control	14.321
	SRR6706287	Light intensity 50%	13.461
	SRR6706288	Light intensity 20%	13.857
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.824
	CNS0095593	Slightly white alabastrum(diploid) 2	14.038
	CNS0095594	Slightly white alabastrum(diploid) 3	14.529
	CNS0095595	Whole white alabastrum(diploid) 2	12.245
	CNS0095596	Whole white alabastrum(diploid) 3	9.777
	CNS0095597	Whole white alabastrum(diploid) 4	11.544
	CNS0095598	Silvery flower (diploied) 1	42.177
	CNS0095599	Silvery flower (diploied) 2	25.894
	CNS0095600	Silvery flower (diploied) 3	27.604
	CNS0095601	Golden flower (diploid) 1	31.966
	CNS0095602	Golden flower (diploid) 2	32.720
	CNS0095603	Golden flower (diploid) 3	31.627
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.307
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.294
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.703
	CNS0095607	Whole white alabastrum(tetraploid) 1	9.062
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.321
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.760
	CNS0095610	Silvery flower (tetraploid) 1	38.830
	CNS0095611	Silvery flower (tetraploid) 2	26.015
	CNS0095612	Silvery flower (tetraploid) 3	24.310
	CNS0095613	Golden flower (tetraploid) 1	29.649
	CNS0095614	Golden flower (tetraploid) 2	36.659
	CNS0095615	Golden flower (tetraploid) 3	29.887
CRA001975	CRR073297	Stem 1	15.145
	CRR073298	Stem 2	10.301
	CRR073299	Stem 3	6.586
	CRR073300	Leaf 1	13.131
	CRR073301	Leaf 2	12.201
	CRR073302	Leaf 3	4.911
	CRR073303	Juvenile bud 1	8.814
	CRR073304	Juvenile bud 2	6.144
	CRR073305	Juvenile bud 3	9.573
	CRR073306	Third green 1	4.610
	CRR073307	Third green 2	3.106
	CRR073308	Third green 3	5.203
	CRR073309	Second white 1	5.603
	CRR073310	Second white 2	6.349
	CRR073311	Second white 3	6.603
	CRR073312	Silver flowering 1	3.464
	CRR073313	Silver flowering 2	3.297
	CRR073314	Silver flowering 3	4.348
	CRR073315	Gold flowering 1	1.555
	CRR073316	Gold flowering 2	4.476
	CRR073317	Gold flowering 3	1.890
	CRR073318	Tawny withering 1	11.081
	CRR073319	Tawny withering 2	11.792
	CRR073320	Tawny withering 3	9.494