Detail information of GWHGAAZE005398


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011095021.11.85059E-82PREDICTED: selT-like protein [Sesamum indicum]
Swissprottr|Q9STZ2|SELT_ARATH1E-77SelT-like protein (Precursor)
trEMBLtr|A0A022RPI9|A0A022RPI9_ERYGU7E-80Uncharacterized protein {ECO:0000313|EMBL:EYU41911.1}
TAIR10AT5G58640.16E-49Selenoprotein, Rdx type

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene73083857317553-
GWHAAZE00000002mRNA73083857317553-
GWHAAZE00000002exon73083857308900-
GWHAAZE00000002exon73089937309058-
GWHAAZE00000002exon73093837309435-
GWHAAZE00000002exon73095327309580-
GWHAAZE00000002exon73101467310464-
GWHAAZE00000002exon73172137317289-
GWHAAZE00000002exon73174047317553-
GWHAAZE00000002CDS73174047317553-
GWHAAZE00000002CDS73172137317289-
GWHAAZE00000002CDS73101467310464-
GWHAAZE00000002CDS73095327309580-
GWHAAZE00000002CDS73093837309435-
GWHAAZE00000002CDS73089937309058-
GWHAAZE00000002CDS73088207308900-
GWHAAZE00000002three_prime_UTR73083857308819-
Transcript Sequence

Network for GWHGAAZE005398

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0201


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10262.10Rdx642585.20E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.274
SRR3591706second leaf13.689
SRR3591707mature leaf11.369
SRR3591708Shoot apex23.422
SRR3591709Stem22.276
SRR3591710White floral bud24.191
SRR3591711White flower15.073
SRR3591712Green floral bud41.618
SRR3591713Yellow flower13.692
SRP173429 SRR8316895Juvenile bud stage 20.020
SRR8316896Juvenile bud stage 30.675
SRR8316897Juvenile bud stage 12.889
SRR8316894Third green stage 13.217
SRR8316900Third green stage 50.073
SRR8316901Third green stage 49.748
SRR8316898Complete white stage 19.392
SRR8316899Complete white stage 47.168
SRR8316903Complete white stage 23.629
SRR8316902Silver flowering stage11.952
SRR8316904Silver flowering stage13.371
SRR8316905Silver flowering stage6.734
SRR8316906Gold flowering stage 18.030
SRR8316907Gold flowering stage 17.563
SRR8316908Gold flowering stage 10.744
SRP132670SRR6706286Control34.394
SRR6706287Light intensity 50%32.640
SRR6706288Light intensity 20%38.532
CNP0000432CNS0095592Slightly white alabastrum(diploid) 143.242
CNS0095593Slightly white alabastrum(diploid) 238.797
CNS0095594Slightly white alabastrum(diploid) 342.467
CNS0095595Whole white alabastrum(diploid) 251.714
CNS0095596Whole white alabastrum(diploid) 363.501
CNS0095597Whole white alabastrum(diploid) 461.994
CNS0095598Silvery flower (diploied) 124.389
CNS0095599Silvery flower (diploied) 222.277
CNS0095600Silvery flower (diploied) 329.249
CNS0095601Golden flower (diploid) 118.506
CNS0095602Golden flower (diploid) 224.521
CNS0095603Golden flower (diploid) 320.382
CNS0095604Slightly white alabastrum(tetraploid) 138.410
CNS0095605Slightly white alabastrum(tetraploid) 240.198
CNS0095606Slightly white alabastrum(tetraploid) 324.031
CNS0095607Whole white alabastrum(tetraploid) 150.106
CNS0095608Whole white alabastrum(tetraploid) 251.810
CNS0095609Whole white alabastrum(tetraploid) 335.993
CNS0095610Silvery flower (tetraploid) 115.870
CNS0095611Silvery flower (tetraploid) 216.833
CNS0095612Silvery flower (tetraploid) 313.506
CNS0095613Golden flower (tetraploid) 112.363
CNS0095614Golden flower (tetraploid) 213.634
CNS0095615Golden flower (tetraploid) 39.681
CRA001975CRR073297Stem 123.921
CRR073298Stem 223.701
CRR073299Stem 322.692
CRR073300Leaf 132.664
CRR073301Leaf 228.782
CRR073302Leaf 338.703
CRR073303Juvenile bud 137.391
CRR073304Juvenile bud 239.758
CRR073305Juvenile bud 331.418
CRR073306Third green 111.333
CRR073307Third green 215.714
CRR073308Third green 314.217
CRR073309Second white 19.654
CRR073310Second white 29.725
CRR073311Second white 36.315
CRR073312Silver flowering 17.417
CRR073313Silver flowering 210.679
CRR073314Silver flowering 36.100
CRR073315Gold flowering 112.275
CRR073316Gold flowering 210.779
CRR073317Gold flowering 310.661
CRR073318Tawny withering 119.351
CRR073319Tawny withering 217.675
CRR073320Tawny withering 318.392