Detail information of GWHGAAZE005440


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene79255317926129+
GWHAAZE00000002mRNA79255317926129+
GWHAAZE00000002exon79255317925603+
GWHAAZE00000002exon79258917926129+
GWHAAZE00000002CDS79255317925603+
GWHAAZE00000002CDS79258917926129+
Transcript Sequence

Network for GWHGAAZE005440

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01933purM Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.300
SRR3591706second leaf0.208
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.613
SRR3591709Stem4.367
SRR3591710White floral bud2.765
SRR3591711White flower1.247
SRR3591712Green floral bud1.522
SRR3591713Yellow flower0.716
SRP173429 SRR8316895Juvenile bud stage 63.553
SRR8316896Juvenile bud stage 67.631
SRR8316897Juvenile bud stage 68.090
SRR8316894Third green stage 17.840
SRR8316900Third green stage 38.214
SRR8316901Third green stage 60.908
SRR8316898Complete white stage 7.774
SRR8316899Complete white stage 77.766
SRR8316903Complete white stage 14.730
SRR8316902Silver flowering stage19.324
SRR8316904Silver flowering stage12.064
SRR8316905Silver flowering stage6.159
SRR8316906Gold flowering stage 26.666
SRR8316907Gold flowering stage 19.769
SRR8316908Gold flowering stage 16.882
SRP132670SRR6706286Control16.977
SRR6706287Light intensity 50%18.778
SRR6706288Light intensity 20%15.662
CNP0000432CNS0095592Slightly white alabastrum(diploid) 164.621
CNS0095593Slightly white alabastrum(diploid) 291.927
CNS0095594Slightly white alabastrum(diploid) 388.464
CNS0095595Whole white alabastrum(diploid) 266.566
CNS0095596Whole white alabastrum(diploid) 331.254
CNS0095597Whole white alabastrum(diploid) 458.050
CNS0095598Silvery flower (diploied) 1129.665
CNS0095599Silvery flower (diploied) 271.070
CNS0095600Silvery flower (diploied) 351.310
CNS0095601Golden flower (diploid) 183.621
CNS0095602Golden flower (diploid) 263.369
CNS0095603Golden flower (diploid) 364.999
CNS0095604Slightly white alabastrum(tetraploid) 112.675
CNS0095605Slightly white alabastrum(tetraploid) 214.244
CNS0095606Slightly white alabastrum(tetraploid) 38.285
CNS0095607Whole white alabastrum(tetraploid) 114.529
CNS0095608Whole white alabastrum(tetraploid) 216.234
CNS0095609Whole white alabastrum(tetraploid) 36.809
CNS0095610Silvery flower (tetraploid) 112.996
CNS0095611Silvery flower (tetraploid) 28.100
CNS0095612Silvery flower (tetraploid) 310.806
CNS0095613Golden flower (tetraploid) 113.365
CNS0095614Golden flower (tetraploid) 27.594
CNS0095615Golden flower (tetraploid) 33.704
CRA001975CRR073297Stem 132.065
CRR073298Stem 232.622
CRR073299Stem 317.721
CRR073300Leaf 164.773
CRR073301Leaf 280.843
CRR073302Leaf 332.137
CRR073303Juvenile bud 147.750
CRR073304Juvenile bud 224.359
CRR073305Juvenile bud 343.531
CRR073306Third green 17.907
CRR073307Third green 217.772
CRR073308Third green 39.375
CRR073309Second white 17.310
CRR073310Second white 215.248
CRR073311Second white 34.537
CRR073312Silver flowering 19.127
CRR073313Silver flowering 28.751
CRR073314Silver flowering 310.755
CRR073315Gold flowering 121.395
CRR073316Gold flowering 224.137
CRR073317Gold flowering 313.174
CRR073318Tawny withering 166.332
CRR073319Tawny withering 2165.475
CRR073320Tawny withering 381.054